Table 2A.
USA300 Lpp with broad dissemination.
| No1 | Function/annotation | Staphylococcal species and other genera2 |
|---|---|---|
| 02 | Fe ABC transporter/FhuD2 | S.aureus, S.capitis, S.carnosus, S.equorum, S.gallinarum, S.haemolyticus, S.hyicus, S.lugdunensis, S.pasteuri, S.pettenkoferi, S.pseudintermedius, S.saprophyticus, S.schleiferi, S.simiae, S.warneri, |
| S.xylosus, | ||
| Bacillus, Exiguobacterium, Macrococcus, Salinicoccus | ||
| 04 | Fe ABC transporter/SirA | S.aureus, S.agnetis, S.arlettae, S.delphini, S.equorum, S.hyicus, S.intermedius, S.lugdunensis, S.pseudintermedius, S.schleiferi |
| Advenella, Bacillus, Chromohalobacter, Clostridium, Gynuella, Hahella, Halobacteroides, Halomonas, Haloplasma, Jeotgalibacillus, Lysinibacillus, Marinomonas, Paenibacillus, Pectobacterium, Planococcus, Sporosarcina | ||
| 05 | Fe ABC transporter/IsdE | S.aureus, S.auricularis, S.capitis, S.caprae, S.condimenti, S.lentus, S.lugdunensis, S.pasteuri, S.sciuri, S.simulans |
| Bacillus, Carnobacterium, Coprococcus, Eubacterium, Lactobacillus, Listeria, Lysinibacillus, Paenibacillus, Solibacillus, Streptococcus, Terribacillus | ||
| 06 | FepA, Fe-binding protein, part of fep ABC and tat-AC cluster | S.aureus, S.capitis, S.carnosus, S.condimenti, S.epidermidis, S.haemolyticus, S.lugdunensis, S.pasteuri, S.simiae, S.warneri |
| Actinobacillus, Actinoplanes, Bacillus, Bibersteinia, Brevibacillus, Clavibacter, Corynebacterium, Dermacoccus, Exiguobacterium, Gallibacterium, Hyphomicrobium, Kineococcus, Kitasatospora, Kyrpidia, Leptotrichia, Listeria, Lysinibacillus, Mannheimia, Moraxella, Mycobacterium, Neisseria, Paenibacillus, Planococcus, Pseudomonas, Streptococcus, Streptomyces, Yersinia | ||
| 09 | Manganese-binding protein MntC (SitC) | S.aureus, S.capitis, S.caprae, S.carnosus, S.condimenti, S.epidermidis, S.equorum, S.haemolyticus, S.hominis, S.hyicus, S.lugdunensis, S.pasteuri, S.pseudintermedius, S.saprophyticus, S.schleiferi, S.simiae, S.simulans, S.warneri, S.xylosus |
| Aerococcus, Amphibacillus, Bacillus, Carnobacterium, Clostridium, Enterococcus, Exiguobacterium, Finegoldia, Lactobacillus, Macrococcus, Oceanobacillus, Paenibacillus, Streptomyces, Terribacillus, Tetragenococcus | ||
| 10 | Zinc-binding, adcA-like | S.aureus, S.capitis, S.haemolyticus, S.hyicus, S.pasteuri, S.pseudintermedius, S.saprophyticus, S.schleiferi, S.warneri, S.xylosus |
| Bacillus, Enterococcus, Halobacillus, Streptococcus | ||
| 11 | Cobalt and nickel transporter Cnt (Opp1A) | S.aureus, S.epidermidis, S. hyicus, S.lugdunensis, S.pasteuri, S.pseudintermedius, S.saprophyticus, S.schleiferi, S.warneri, S.xylosus, |
| Aggregatibacter, Bacillus, Brevibacillus, Eubacterium, Mannheimia, Methanosarcina, Paenibacillus, Proteus | ||
| 14 | Molybdenum ABC transporter (ModA) | S.aureus, S.capitis, S.caprae, S.carnosus, S.epidermidis, S.haemolyticus, S.hyicus, S.lugdunensis, S.pasteuri, S.pseudintermedius, S.saprophyticus, S.schleiferi, S.simiae, S.warneri, S.xylosus |
| Bacillus, Clostridium, Macrococcus, Paenibacillus, Salinicoccus, Syntrophobotulus | ||
| 15 | Phosphate ABC transporter | S.aureus, S.capitis, S.caprae, S.carnosus, S.epidermidis, S.haemolyticus, S.hyicus, S.lugdunensis, S.pasteuri, S.pseudintermedius, S.saprophyticus, S.schleiferi, S.simiae, S.warneri, S.xylosus |
| Alkaliphilus, Anoxybacillus, Bacillus, Clostridium, Enterobacter, Escherichia, Eubacterium, Exiguobacterium, Geobacillus, Halobacillus, Jeotgalibacillus, Lysinibacillus, Macrococcus, Maribacter, Paenibacillus, Planococcus, Pleurocapsa, Salinicoccus, Sebaldella, Streptomyces, Thermobacillus, Thermosediminibacter | ||
| 16 | Phosphonate ABC transporter | S.aureus, S.capitis, S.caprae, S.epidermidis, S.haemolyticus, S.hominis, S.lugdunensis, S.pasteuri, S.saprophyticus, S.warneri |
| Bacillus, Carnobacterium, Enterobacter, Enterococcus, Lactobacillus, Melissococcus, Paenibacillus, Terribacillus, Weissella | ||
| 17 | Nitrate ABC transporter | S.aureus, S.pseudintermedius, S.saprophyticus, S.schleiferi |
| Bacillus, Clostridium, Geobacillus, Methanosarcina, Ruminiclostridium, Solibacillus | ||
| 18 | Glycine betaine /carnitine/choline ABC transporter (OpuCc) | S.aureus, S.capitis, S.carnosus, S.cohnii, S.condimenti, S.epidermidis, S.equorum, S.gallinarum, S.haemolyticus, S.hyicus, S.lugdunensis, S.pasteuri, S.saprophyticus, S.schleiferi, S.simiae, S.simulans, S.succinus, S.warneri, S.xylosus |
| Bacillus, Carnobacterium, Enterococcus, Lactobacillus, Listeria, Macrococcus, Pediococcus, Solibacillus, Streptococcus, Tetragenococcus, Virgibacillus | ||
| 19 | Amino acid ABC transporter | S.aureus, S.capitis, S.caprae, S.carnosus, S.epidermidis, haemolyticus, S.lugdunensis, S.pasteuri, S.saprophyticus, S.simiae, S.warneri, S. S.xylosus |
| Aggregatibacter, Anoxybacillus, Arthrobacter, Bacillus, Brevibacillus, Brucella, Campylobacter, Clostridium, Ensifer, Gallibacterium, Geobacillus, Haemophilus, Hafnia, Halobacillus, Jeotgalibacillus, Macrococcus, Mesorhizobium, Neisseria, Neorhizobium, Nocardia, Ochrobactrum, Paenibacillus, Photorhabdus, Raoultella, Rhizobium, Sinorhizobium, Streptococcus, Xenorhabdus | ||
| 21 | Oligopeptide ABC transporter (Opp3A) | S.aureus, S.capitis, S.carnosus, S.epidermidis, S.haemolyticus, S.lugdunensis, S.pasteuri, S.pseudintermedius, S.saprophyticus, S.schleiferi, S.xylosus |
| Anoxybacillus, Bacillus, Carnobacterium, Geobacillus, Macrococcus | ||
| 23 | NLPA/D-methionine binding, (GmpC) | S.aureus, S.epidermidis, S.simiae, S.capitis, S.lugdunensis, S.xylosus, S.carnosus, S.schleiferi, S.pseudintermedius |
| Aerococcus, Amphibacillus, Bacillus, Carnobacterium, Clostridium, Enterococcus, Exiguobacterium, Finegoldia, Lactobacillus, Listeria, Macrococcus, Megasphaera, Oceanobacillus, Paenibacillus, Ralstonia, Streptococcus, Streptomyces, Terribacillus, Tetragenococcus | ||
| 24 | D-Methionine ABC transporter | S.aureus, S.capitis, S.caprae, S.carnosus, S.cohnii, S.epidermidis, S.haemolyticus, S.hyicus, S.lugdunensis, S.pasteuri, S.pseudintermedius, S.saprophyticus, S.schleiferi, S.warneri, S.xylosus |
| Acetohalobium, Acidaminococcus, Actinoplanes, Advenella, Amphibacillus, Anoxybacillus, Arcobacter, Azospirillum, Bacillus, Bifidobacterium, Caldicellulosiruptor, Campylobacter, Carnobacterium, Cedecea, Citrobacter, Clostridium, Cronobacter, Desulfitobacterium, Desulfosporosinus, Enterobacter, Enterobacteriaceae, Enterococcus, Erwinia, Exiguobacterium, Finegoldia, Geobacillus, Halobacillus, Jeotgalibacillus, Ketogulonicigenium, Klebsiella, Kluyvera, Kosakonia, Lactobacillus, Leptotrichia, Lipotes, Listeria, Macrococcus, Megamonas, Megasphaera, Melissococcus, Paenibacillus, Pectobacterium, Pediococcus, Pelosinus, Planococcus, Pseudomonas, Salinicoccus, Sebaldella, Selenomonas, Serratia, Sodalis, Solibacillus, Streptomyces, Sulfurospirillum, Terribacillus, Thermoanaerobacterium, Veillonella, Virgibacillus, Xanthomonas | ||
| 25 | Maltose ABC transporter | S.aureus, S.delphini, S.intermedius, S.lentus, S.pseudintermedius, S.sciuri |
| Bacillus, Geobacillus, Salinicoccus | ||
| 26 | CamS sex pheromone biosynthesis | S.aureus, S.capitis, S.carnosus, S.epidermidis, S.haemolyticus, S.hyicus, S.lugdunensis, S.pasteuri, S.pseudintermedius, S.saprophyticus, S.schleiferi, S.simiae, S.warneri, S.xylosus |
| Escherichia, Macrococcus, Salinicoccus | ||
| 27 | Quinol oxidase, subunit II (QoxA) | S.aureus, S.agnetis, S.auricularis, S.capitis, S.caprae, S.carnosus, S.chromogenes, S.cohnii, S.epidermidis, S.haemolyticus, S.hominis, S.hyicus, S.lugdunensis, S.pasteuri, S.pettenkoferi, S.pseudintermedius, S.saprophyticus, S.schleiferi, S.simiae, S.warneri, S.xylosus, |
| Bacillus, Geobacillus, Halobacillus, Listeria, Lysinibacillus, Paenibacillus, Salinicoccus, Streptococcus, Virgibacillus | ||
| 28 | Electron transfer domain/SaeP | S.aureus, S.auricularis, S.capitis, S.caprae, S.carnosus, S.condimenti, S.delphini, S.epidermidis, S.haemolyticus, S.intermedius, S.lentus, S.lugdunensis, S.microti, S.pettenkoferi, S.pseudintermedius, S.saprophyticus, S.schleiferi, S.sciuri, S.simiae, S.simulans, S.vitulinus, S.xylosus |
| Bacillus, Brochothrix, Carnobacterium, Enterococcus, Fictibacillus, Listeria, Mycobacterium, Paenibacillus | ||
| 31 | YidC (OxaA) - essential protein | S.aureus, S.arlettae, S.capitis, S.caprae, S.carnosus, S.cohnii, S.condimenti, S.delphini, S.epidermidis, S.equorum, S.gallinarum, S.haemolyticus, S.hominis, S.hyicus, S.lugdunensis, S.massiliensis, S.pasteuri, S.pseudintermedius, S.saprophyticus, S.schleiferi, S.simiae, S.simulans, S.succinus, S.warneri, S.xylosus |
| Bacillus, Halobacillus, Lysinibacillus, Macrococcus, Planococcus, Salinicoccus, Solibacillus, Xylanimonas | ||
| 33 | Membrane bound penicillinases BlaZ | S.aureus, S.agnetis, S.capitis, S.epidermidis, S.equorum, S.haemolyticus, S.lugdunensis, S.pseudintermedius, S.saprophyticus, S.warneri, S.xylosus, |
| Acidaminococcus, Bacillus, Carnobacterium, Enterococcus, Escherichia, Kribbella, Macrococcus, Paenibacillus, Salinicoccus, Streptococcus, Streptomyces | ||
| 49 | Unknown function | USA300, S.arlettae, S.capitis, S.carnosus, S.cohnii, S.epidermidis, S.equorum, S.haemolyticus, S.hominis, S.lugdunensis, S.pasteuri, S.pettenkoferi, S.pseudintermedius, S.saprophyticus, S.sciuri, S.warneri, S.xylosus |
| Bacillus, Carnobacterium, Corynebacterium, Dermacoccus, Enterococcus, Exiguobacterium, Geobacillus, Jeotgalibacillus, Kocuria, Kytococcus, Listeria, Lysinibacillus, Macrococcus, Oceanobacillus, Paenibacillus, Planococcus, Salinicoccus, Solibacillus, Streptococcus, Terribacillus, Virgibacillus (see Table 2D) | ||
| 57 | Unknown function | S.aureus, S.agnetis, S.capitis, S.haemolyticus, S.hyicus, S.simiae, |
| Bacillus, Clostridium, Enterococcus, Herbinix, Lactobacillus, Leuconostoc, Streptococcus |
Numbering and proposed function are the same as listed in Table 1.
The other genera are in bold letters.