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. 2016 Sep 12;90(19):8395–8409. doi: 10.1128/JVI.01068-16

TABLE 5.

Root mean square deviations for gp120(W69A/S115W)93TH057 and wild-type gp12093TH057 corees

Component Value (RMSD; Å) fora:
1 2 3
Complex 0.972
Fab 0.924
gp12093TH057 coree 0.719 0.926 0.868
7-Stranded β-sandwich 0.511 0.643 0.804
Layer 1 0.448 0.581 0.683
Layer 2 0.725 1.18 0.985
Layer 3 0.376 0.269 0.372
Outer domain 0.786 0.838 0.843
a

Root mean square deviations (RMSD) for gp120 coree atoms of N60-i3 Fab-gp120(W69A/S115W)93TH057 coree-M48U1 and N60-i3 Fab-gp12093TH057-M48U1 (PDB entry 4RFO) complexes (column 1), N60-i3 Fab-gp120(W69A/S115W)93TH057 coree-M48U1 and N5-i5- gp12093TH057-d1d2CD4 (PDB entry 4H8W) complexes (column 2), and N60-i3 Fab-gp12093TH057-M48U1 (PDB entry 4RFO) and N5-i5- gp12093TH057-d1d2CD4 (PDB entry 4H8W) complexes (column 3) are shown.