Table 1.
Modification | Description | Ref |
---|---|---|
Alzheimer’s Disease | ||
rs17183619 | GWAS-Statistical interaction with APP SNP rs2096488 | (Jun et al. 2012) |
rs61754599 | GWAS-Missense mutation (G810R) altered δ-catenin localization and increased secreted AB1-42 in HEK293 cells | (Jun et al. 2012) |
Cri-du-chat | ||
CNV | Case study: eight-year-old African-American female- Promoter region and alternative exons 1–14 are duplicated and exons 15–68 of δ-catenin are deleted. | (Sardina et al. 2014) |
Hemizygous deletion | Case studies: correlation analysis from three previous reports- Hemizygous deletion within 5p15.2pter leads to severe mental retardation | (Medina et al. 2000) |
Deletion (knockout) | δ-cat−/− mice were viable but showed decline in cognitive functions and significantly reduced N-cadherin and PSD95 protein level. | (Israely et al. 2004) |
Autism | ||
G34S, P189L, P224L, R454H, Q507P | Case study: female-enriched multiplex families- Hypomorphic mutations found in patients and conserved in zebrafish embryos model | (Turner et al. 2015) |
CNV | Case studies: reexamination of previously reported cases and literature review- Ten deletions and two duplications, seven overlapping one or more exons. Deletions leading to loss-of-function suggest happloinsufficiency. | (Turner et al. 2015) |
Schizophrenia | ||
CNV | Case studies: patients from the Netherlands- CNV of seven genes in 5p15.2 with a breakpoint disrupting the terminal portion of CTNND2 gene in a female patient. | (Vrijenhoek et al. 2008) |
rs6873547 | Case study: patients from the Netherlands- CTNND2 SNP with the strongest association with Schizophrenia. Top ten SNPs for anxiety disorder, major depressive disorder, and bipolar disorder were also reported. | (Nivard et al. 2014) |
Intellectual Disability | ||
Translocation breakpoint | Case study: mother and daughter- balanced translocation of t(1;8)(p22;q24) and t(5;18)(p15;q11) resulted in problems with learning (dyslexia, attention deficit, speech delay). The breakpoint was located in intron 9 of the δ-catenin resulting in a loss-of-function. | (Hofmeister et al. 2015) |
Deletion of exons 12–18 | Case study: fourteen-year-old male- Presented similar phenotype with more pronounced learning disabilities and dyslexia. | (Hofmeister et al. 2015) |
CNV | Case study: two males with delayed developmental milestones- intragenic deletion leads to mild intellectual disability. | (Belcaro et al. 2015) |
Myopia | ||
rs1479617 | Case study: patients from China- This SNP and 11q21.1 genomic region significantly differed between the pathological myopia and control groups of Chinese patients. | (Yu et al. 2012) |
rs12716080 rs6885224 |
Meta-analysis - Chinese and Japanese patients revealed a strong correlation with high myopia. | (Liu and Zhang 2014) |
rs6885224 | Case-control series study- displayed protective properties when compared in Chinese patients with high or moderate myopia with controls. | (Lu et al. 2011) |