Table 1. Number of molecular markers, genetic distance, marker density in each linkage group of the Brassica napus TNDH 2041-map.
Linkage Group | Number of molecular Markers | Genetic Distance (cM) | Marker density (markers/cM) | SNP bin | SNP bin density (markers/cM) | Original markers |
---|---|---|---|---|---|---|
A1 | 142 | 89.4 | 1.63 | 132 | 1.48 | 10 |
A2 | 107 | 120.6 | 0.91 | 91 | 0.75 | 16 |
A3 | 158 | 131.8 | 1.44 | 121 | 0.92 | 37 |
A4 | 105 | 82.0 | 1.31 | 91 | 1.11 | 14 |
A5 | 105 | 112.7 | 0.83 | 94 | 0.83 | 11 |
A6 | 141 | 128.8 | 1.15 | 120 | 0.93 | 21 |
A7 | 131 | 104.9 | 1.30 | 108 | 1.03 | 23 |
A8 | 81 | 83.8 | 0.98 | 67 | 0.80 | 14 |
A9 | 153 | 139.7 | 1.10 | 102 | 0.73 | 51 |
A10 | 104 | 75.9 | 1.37 | 85 | 1.12 | 19 |
C1 | 97 | 92.6 | 1.06 | 90 | 0.97 | 7 |
C2 | 85 | 74.4 | 0.85 | 78 | 1.05 | 7 |
C3 | 127 | 142.4 | 0.84 | 104 | 0.73 | 23 |
C4 | 95 | 116.2 | 0.80 | 79 | 0.68 | 16 |
C5 | 62 | 133.4 | 0.47 | 52 | 0.39 | 10 |
C6 | 78 | 106.2 | 0.73 | 59 | 0.56 | 19 |
C7 | 83 | 93.5 | 0.76 | 67 | 0.72 | 16 |
C8 | 107 | 108.1 | 0.91 | 98 | 0.91 | 9 |
C9 | 80 | 141.4 | 0.57 | 60 | 0.42 | 20 |
A genome | 1227 | 1069.6 | 1.18 | 1011 | 0.95 | 216 |
C genome | 814 | 1008.3 | 0.76 | 687 | 0.68 | 127 |
Total(A + C) | 2041 | 2077.9 | 0.97 | 1698 | 0.82 | 343 |
SNP bin, the smallest unit where chromosome recombination events happen. Original markers, SSR, RFLP and AFLP markers.