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. 2016 Sep 14;7(1):133. doi: 10.1186/s13287-016-0384-2

Table 2.

Top scoring networks from the IPA knowledge base that involve proteins differentially expressed in young compared with old chondrogenic, tenogenic and osteogenic constructs

Construct Identification of associated network functions Score
Chondrogenica Cell death and survival, lipid metabolism, small molecule biochemistry 43
Cellular movement, cell death and survival, cancer 33
Connective tissue disorders, haematological disease, hereditary disorder 31
Cellular assembly and organisation, cellular development, connective tissue development and function 28
Cell signalling, nucleic acid metabolism, small molecule biochemistry 26
Tenogenica Carbohydrate metabolism, haematological disease, immunological disease 59
Developmental disorder, hereditary disorder, inflammatory disease 43
Cell-to-cell signalling and interaction, embryonic development, tissue development 36
Endocrine system development and function, energy production, small molecule biochemistry 36
Cellular assembly and organisation, cellular function and maintenance, cellular compromise 31
Osteogenicb Cellular assembly and organisation, tissue development, infectious disease 58
Cellular compromise, developmental disorder, haematological disease 32
Protein synthesis, developmental disorder, hereditary disorder 29
Lipid metabolism, nucleic acid metabolism, small molecule biochemistry 8

aSignificant DE proteins with p < 0.05, q < 0.05 and ±2-fold change

bSignificant DE proteins with p < 0.05 and ±2-fold change

DE differentially expressed, IPA ingenuity pathway analysis