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. 2016 Jun 24;12(8):3473–3481. doi: 10.1021/acs.jctc.6b00339

Table 2. MSM Hyperparameters.

hyperparameter grid search values
number of tICA components 1, 2, 4, 8
tICA lag time (ns) 50, 100, 200
number of MSM microstates 50, 100, 250, 500, 1000,
  2000, 4000, 8000
MSM lag time (ns) 0.2, 5, 10, 25, 50, 100