Table 3.
Gene expression profile in methane or methylamine grown cells of M. universalis FAM5.
| Gene ID (Old) | Gene ID (New) | Gene Product | Methanol (RPKM) * | Methylamine (RPKM) * | Fold Change | q-Value |
|---|---|---|---|---|---|---|
| Methylamine oxidation | ||||||
| METUNv1_760110 | METUNv2_580110 | Gmas, Gamma glutamylmethylamide synthetase | 2961.80 | 19,440.25 | 6.56 | 0.65 |
| METUNv1_760111 | METUNv2_580111 | MgsA, N-methyl glutamate synthase subunit A | 2727.43 | 22,221.30 | 8.15 | 0.73 |
| METUNv1_760112 | METUNv2_580112 | MgsB, N-methyl glutamate synthase subunit B | 2680.76 | 19,852.55 | 7.41 | 0.69 |
| METUNv1_760113 | METUNv2_580113 | MgsC, N-methyl glutamate synthase subunit C | 4221.56 | 53,956.55 | 12.78 | 0.67 |
| METUNv1_760114 | METUNv2_580114 | MgdA, N-methyl glutamate dehydrogenase/oxidoreductase subunit A | 1414.90 | 13,014.45 | 9.20 | 0.74 |
| METUNv1_760115 | METUNv2_580115 | MgdB, N-methyl glutamate dehydrogenase/oxidoreductase subunit B | 388.00 | 3906.31 | 10.07 | 0.74 |
| METUNv1_760116 | METUNv2_580116 | MgdC, N-methyl glutamate dehydrogenase/oxidoreductase subunit C | 3389.10 | 26,611.05 | 7.85 | 0.75 |
| METUNv1_760117 | METUNv2_580117 | MgdD, N-methyl glutamate dehydrogenase/oxidoreductase subunit D | 701.94 | 7962.74 | 11.34 | 0.71 |
| METUNv1_760127 | METUNv2_580127 | QhpB, Quinohemoprotein amine dehydrogenase, beta subunit | 420.06 | 4164.18 | 9.91 | 0.68 |
| METUNv1_760128 | METUNv2_580128 | QhpA, Quinohemoprotein amine dehydrogenase, alpha subunit | 733.76 | 7390.84 | 10.07 | 0.65 |
| METUNv1_760130 | METUNv2_580130 | QhpC, Quinohemoprotein amine dehydrogenase, SAM-radical dependent activating subunit | 380.86 | 4283.06 | 11.25 | 0.00 |
| Methanol oxidation | ||||||
| METUNv1_770214 | METUNv2_590217 | XoxF1, PQQ-linked dehydrogenase | 2023.28 | 3380.16 | 1.67 | 0.50 |
| METUNv1_770216 | METUNv2_590218 | XoxF2, PQQ-linked dehydrogenase | 10,962.17 | 16,741.70 | 1.53 | 0.05 |
| METUNv1_590046 | METUNv2_420045 | XoxF3, PQQ-dependent dehydrogenase | 1213.63 | 659.01 | −1.84 | 0.62 |
| METUNv1_590042 | METUNv2_420041 | XoxJ3, Extracellular solute-binding protein family 3 | 4399.57 | 1403.51 | −3.13 | 0.05 |
| METUNv1_590043 | METUNv2_420042 | XoxG3, Cytochrome c class I | 3156.11 | 1089.89 | −2.90 | 0.30 |
| METUNv1_590049 | METUNv2_420048 | Mdh2, PQQ-dependent methanol/ethanol dehydrogenase | 48,100.35 | 34,793.20 | −1.38 | 0.77 |
| METUNv1_590050 | METUNv2_420049 | Mdh2J, Extracellular solute-binding protein family | 2486.88 | 903.00 | −2.75 | 0.69 |
| METUNv1_590051 | METUNv2_420050 | Mdh2G, cytochrome c-type protein | 1732.91 | 595.39 | −2.91 | 0.58 |
| Formaldehyde oxidation | ||||||
| METUNv1_580096 | METUNv2_410093 | Fae 1, Formaldehyde-activating enzyme | 18,235.00 | 11,635.85 | −1.57 | 0.82 |
| METUNv1_660037 | METUNv2_480039 | Fae 2, Formaldehyde-activating enzyme | 561.52 | 642.50 | 1.14 | 0.89 |
| METUNv1_700516 | METUNv2_520523 | Fae 3, Formaldehyde activating enzyme | 584.51 | 6861.86 | 11.74 | 0.00 |
| METUNv1_590006 | METUNv2_420006 | Orf 9, Involved in biosynthesis of tetrahydromethanopterin. Essential for formaldehyde oxidation. | 430.06 | 187.51 | −2.29 | 0.21 |
| METUNv1_580095 | METUNv2_410092 | Orf 7, Involved in tetrahydromethanopterin-linked formaldehyde oxidation. | 371.25 | 549.26 | 1.48 | 0.75 |
| METUNv1_580094 | METUNv2_410091 | Orf 5, Involved in biosynthesis of tetrahydromethanopterin | 489.69 | 493.89 | 1.01 | 0.93 |
| METUNv1_580093 | METUNv2_410090 | Mch, Methenyltetrahydromethanopterin cyclohydrolase | 620.26 | 736.89 | 1.19 | 0.87 |
| METUNv1_580092 | METUNv2_410089 | OrfY, Involved in tetrahydromethanopterin C1 transfer. | 896.40 | 819.12 | −1.09 | 0.94 |
| METUNv1_580091 | METUNv2_410088 | MtdB, NAD-dependent methylenetetrahydromethanopterin dehydrogenase | 1295.29 | 1379.77 | 1.07 | 0.88 |
| METUNv1_580088 | METUNv2_410086 | FhcB, Formyltransferase/hydrolase complex subunit B | 587.63 | 515.00 | −1.14 | 0.92 |
| METUNv1_580087 | METUNv2_410085 | FhcA, Formyltransferase/hydrolase complex subunit A | 766.77 | 744.38 | −1.03 | 0.93 |
| METUNv1_580086 | METUNv2_410084 | FhcD, Formyltransferase/hydrolase complex subunit D | 598.76 | 547.64 | −1.09 | 0.94 |
| METUNv1_580085 | METUNv2_410083 | FhcC, Formyltransferase/hydrolase complex subunit C | 634.50 | 467.32 | −1.36 | 0.88 |
| METUNv1_590040 | METUNv2_420039 | Ald, Tungsten-containing aldehyde ferredoxin oxidoreductase | 408.13 | 155.57 | −2.62 | 0.17 |
| METUNv1_490013 | METUNv2_320014 | AldB, Aldehyde dehydrogenase B | 2762.93 | 2224.63 | −1.24 | 0.94 |
| Formate oxidation | ||||||
| METUNv1_770385 | METUNv2_590384 | Fdh, Putative formate dehydrogenase subunit A | 634.02 | 668.94 | 1.06 | 0.92 |
| METUNv1_700257 | METUNv2_520260 | FdhD, NAD-linked formate dehydrogenase delta subunit | 38.00 | 76.63 | 2.02 | 0.55 |
| METUNv1_700258 | METUNv2_520261 | FdhC, Formate dehydrogenase, accessory protein | 751.50 | 1024.07 | 1.36 | 0.74 |
| METUNv1_700259 | METUNv2_520262 | FdhA, NAD-dependent formate dehydrogenase alpha subunit | 3720.44 | 5479.72 | 1.47 | 0.39 |
| METUNv1_700260 | METUNv2_520263 | FdhB, NAD-dependent formate dehydrogenase beta subunit | 2758.00 | 4434.84 | 1.61 | 0.46 |
| METUNv1_700261 | METUNv2_520264 | FdhG, NAD-dependent formate dehydrogenase gamma subunit | 1127.75 | 1882.41 | 1.67 | 0.67 |
| METUNv1_700262 | METUNv2_520265 | FdhR, Formate dehydrogenase regulator | 210.25 | 231.00 | 1.10 | 0.90 |
| METUNv1_570005 | METUNv2_400021 | FdsA, NAD-dependent, tungsten-containing formate dehydrogenase alpha subunit | 1438.46 | 1527.51 | 1.06 | 0.91 |
| METUNv1_570006 | METUNv2_400022 | FdsB, NAD-dependent, tungsten-containing formate dehydrogenase beta subunit | 951.26 | 1018.18 | 1.07 | 0.90 |
| H4F-pathway/Serine cycle/Glyoxylate shunt | ||||||
| METUNv1_460318 | METUNv2_290319 | FtfL, formate-tetrahydrofolate ligase/synthetase | 4729.66 | 1674.32 | −2.82 | 0.54 |
| METUNv1_460309 | METUNv2_290310 | Fch, Methenyltetrahydrofolate cyclohydrolase | 2091.39 | 1541.64 | −1.36 | 0.90 |
| METUNv1_460310 | METUNv2_290311 | MdtA, NADP-dependent methylenetetrahydrofolate dehydrogenase | 4363.44 | 2973.78 | −1.47 | 0.93 |
| METUNv1_460311 | METUNv2_290312 | Hpr, Hydroxypyruvate reductase, NAD(P)H-dependent. | 3620.17 | 3220.89 | −1.12 | 0.89 |
| METUNv1_460312 | METUNv2_290313 | Sga, Serine-glyoxylate aminotransferase | 10,590.93 | 8570.41 | −1.24 | 0.79 |
| METUNv1_460313 | METUNv2_290314 | GlyA, Serine hydroxymethyltransferase | 6313.10 | 5292.54 | −1.19 | 0.87 |
| METUNv1_460314 | METUNv2_290315 | MtkA, Malate thiokinase large subunit | 4955.01 | 6292.07 | 1.27 | 0.73 |
| METUNv1_460315 | METUNv2_290316 | MtkB, Malate thiokinase small subunit | 5081.45 | 5363.84 | 1.06 | 0.73 |
| METUNv1_460316 | METUNv2_290317 | Ppc1, phosphoenolpyruvate carboxylase | 2661.63 | 2768.19 | 1.04 | 0.86 |
| METUNv1_460317 | METUNv2_290318 | Mcl, malyl-CoA lyase | 3260.85 | 4275.94 | 1.31 | 0.58 |
| METUNv1_770329 | METUNv2_590331 | Gk, Glycerate kinase | 1197.01 | 1116.38 | −1.07 | 0.93 |
| METUNv1_770169 | METUNv2_590170 | Ppc2, Phosphoenolpyruvate carboxylase | 1034.15 | 1074.00 | 1.04 | 0.91 |
| METUNv1_460302 | METUNv2_290303 | Eno, Enolase | 2095.13 | 1936.51 | −1.08 | 0.92 |
| METUNv1_710053 | METUNv2_530053 | Pgm, Phosphoglyceromutase | 470.57 | 517.14 | 1.10 | 0.90 |
| METUNv1_620020 | METUNv2_450021 | Ms, Malate synthase A | 353.94 | 269.76 | −1.31 | 0.89 |
| METUNv1_620018 | METUNv2_450018 | Icl, Isocitrate lyase | 12,174.92 | 8389.98 | −1.45 | 0.85 |
| CO2 Fixation (CBB cycle) | ||||||
| METUNv1_750044 | METUNv2_570044 | CbbR, RuBisCO operon transcriptional regulator | 195.62 | 189.12 | −1.03 | 0.93 |
| METUNv1_750045 | METUNv2_570045 | CbbL, Ribulose-1,5-bisphosphate carboxylase large subunit | 127.63 | 130.88 | 1.03 | 0.94 |
| METUNv1_750046 | METUNv2_570046 | CbbS, Ribulose bisphosphate carboxylase small subunit | 41.62 | 47.50 | 1.14 | 0.92 |
| METUNv1_750047 | METUNv2_570047 | CbxX, chromosomal AAA type ATPase | 8.75 | 11.94 | 1.36 | 0.89 |
| METUNv1_750048 | METUNv2_570048 | CbbY, haloacid dehalogenase | 7.25 | 14.56 | 2.01 | 0.73 |
| METUNv1_750049 | METUNv2_570049 | CbbE, Ribulose-phosphate 3-epimerase | 13.88 | 16.13 | 1.16 | 0.91 |
| METUNv1_750050 | METUNv2_570050 | Pgp, phosphoglycolate phosphatase | 12.50 | 13.00 | 1.04 | 0.94 |
| METUNv1_750051 | METUNv2_570051 | CbbF, Fructose-1,6-bisphosphatase | 26.75 | 30.51 | 1.14 | 0.92 |
| METUNv1_750052 | METUNv2_570052 | CbbP, Phosphoribulokinase | 26.69 | 32.00 | 1.20 | 0.92 |
| METUNv1_750053 | METUNv2_570053 | CbbT, Transketolase | 24.88 | 42.56 | 1.71 | 0.73 |
| METUNv1_750054 | METUNv2_570054 | CbbG, Glyceraldehyde-3-phosphate dehydrogenase | 17.50 | 19.56 | 1.12 | 0.93 |
| METUNv1_750055 | METUNv2_570055 | CbbA, Fructose-bisphosphate aldolase | 72.75 | 65.50 | −1.11 | 0.93 |
| METUNv1_700111 | METUNv2_520114 | CbbR, RuBisCO operon transcriptional regulator | 360.50 | 255.84 | −1.41 | 0.90 |
| METUNv1_760018 | METUNv2_580018 | CbbQ, Post-translational RubisCO activator | 16.25 | 19.38 | 1.19 | 0.91 |
| Sugar Phosphate Interconversions | ||||||
| METUNv1_470279 | METUNv2_300282 | Fbp, Fructose-1,6-bisphosphatase | 403.90 | 440.81 | 1.09 | 0.91 |
| METUNv1_700104 | METUNv2_520106 | Fba, Fructose-bisphosphate aldolase | 920.68 | 1094.83 | 1.19 | 0.85 |
| METUNv1_700105 | METUNv2_520107 | Pyk, Pyruvate kinase II | 807.00 | 786.28 | −1.03 | 0.92 |
| METUNv1_700106 | METUNv2_520108 | Pgk, Phosphoglycerate kinase | 693.63 | 684.62 | −1.01 | 0.92 |
| METUNv1_700107 | METUNv2_520109 | Gapdh, Glyceraldehyde 3-phosphate dehydrogenase | 1478.94 | 1536.51 | 1.04 | 0.90 |
| METUNv1_700108 | METUNv2_520110 | Tk, Transketolase | 982.15 | 730.45 | −1.34 | 0.89 |
| METUNv1_700109 | METUNv2_520111 | Prk, Phosphoribulokinase | 380.94 | 483.87 | 1.27 | 0.82 |
| METUNv1_700110 | METUNv2_520112 | Fbp3, Fructose-1,6-bisphosphatase | 902.64 | 846.62 | −1.07 | 0.94 |
| METUNv1_470090 | METUNv2_300091 | Pps, Phosphoenolpyruvate synthase | 1610.66 | 1360.78 | −1.18 | 0.94 |
| METUNv1_460093 | METUNv2_290089 | Pck, Phosphoenolpyruvate carboxykinase (GTP) | 242.99 | 191.39 | −1.27 | 0.89 |
| METUNv1_580038 | METUNv2_410037 | Pfk, Pyrophosphate-dependent phosphofructokinase | 866.70 | 1075.27 | 1.24 | 0.85 |
| METUNv1_580036 | METUNv2_410036 | Pyrophosphate-energized inorganic pyrophosphatase | 747.52 | 887.26 | 1.19 | 0.88 |
| METUNv1_580049 | METUNv2_410048 | Pyrophosphate phosphohydrolase | 555.12 | 602.37 | 1.09 | 0.89 |
| TCA cycle | ||||||
| METUNv1_700127 | METUNv2_520130 | E1 component of pyruvate dehydrogenase | 959.88 | 1210.51 | 1.26 | 0.80 |
| METUNv1_700126 | METUNv2_520129 | E2 component of pyruvate dehydrogenase | 217.00 | 302.25 | 1.39 | 0.77 |
| METUNv1_700125 | METUNv2_520128 | E3 component of pyruvate dehydrogenase | 482.26 | 555.08 | 1.15 | 0.88 |
| METUNv1_700186 | METUNv2_520190 | Succinyl-CoA synthetase beta subunit | 705.14 | 556.31 | −1.27 | 0.91 |
| METUNv1_700187 | METUNv2_520191 | Succinyl-CoA synthetase alpha subunit | 622.44 | 414.43 | −1.50 | 0.86 |
| METUNv1_470127 | METUNv2_300128 | Fumarate hydratase class I | 659.82 | 590.00 | −1.12 | 0.93 |
| METUNv1_460167 | METUNv2_290164 | Fumarate hydratase class II (fumarase C) | 185.50 | 141.26 | −1.31 | 0.91 |
| METUNv1_460003 | METUNv2_290002 | ME1, Malic Enzyme | 952.12 | 789.15 | −1.21 | 0.93 |
| METUNv1_520009 | METUNv2_350011 | Mdh, Malate dehydrogenase | 2673.56 | 1934.79 | −1.38 | 0.91 |
| METUNv1_520011 | METUNv2_350013 | Succinate dehydrogenase cytochrome b556 subunit | 324.52 | 191.00 | −1.70 | 0.70 |
| METUNv1_520012 | METUNv2_350014 | Succinate dehydrogenase anchor subunit | 572.13 | 412.89 | −1.39 | 0.88 |
| METUNv1_520013 | METUNv2_350015 | Succinate dehydrogenase flavoprotein subunit | 4086.04 | 2492.77 | −1.64 | 0.84 |
| METUNv1_520014 | METUNv2_350016 | Succinate dehydrogenase Fe–S protein | 843.00 | 709.16 | −1.19 | 0.93 |
| METUNv1_520016 | METUNv2_350018 | Citrate synthase | 2249.29 | 2218.66 | −1.01 | 0.91 |
| METUNv1_520017 | METUNv2_350019 | E1 component of alpha-ketoglutarate dehydrogenase | 1429.24 | 1533.03 | 1.07 | 0.89 |
| METUNv1_520018 | METUNv2_350020 | E2 component of alpha-ketoglutarate dehydrogenase | 697.75 | 762.99 | 1.09 | 0.90 |
| METUNv1_520019 | METUNv2_350021 | E3 component of alpha-ketoglutarate dehydrogenase | 1364.02 | 1401.04 | 1.03 | 0.89 |
| METUNv1_620012 | METUNv2_450011 | Isocitrate dehydrogenase kinase/phosphatase | 241.63 | 308.13 | 1.28 | 0.84 |
| METUNv1_620013 | METUNv2_450012 | Isocitrate dehydrogenase (NADP+) | 2578.02 | 2899.29 | 1.12 | 0.80 |
| Amino Acid Synthesis | ||||||
| METUNv1_660052 | METUNv2_480054 | Glutamate synthase (NADPH) large chain (NADPH-GOGAT) | 3985.94 | 2866.80 | −1.39 | 0.87 |
| METUNv1_660053 | METUNv2_480055 | Glutamate synthase (NADPH) small chain (NADPH-GOGAT) | 1357.89 | 903.01 | −1.50 | 0.91 |
| METUNv1_450044 | METUNv2_280044 | Glutamine synthetase (Glutamate-ammonia ligase) | 2361.78 | 2288.13 | −1.03 | 0.56 |
| METUNv1_470103 | METUNv2_300104 | Glutamate dehydrogenase, NADP-specific (NADP-GDH) | 1040.15 | 1519.76 | 1.46 | 0.93 |
| METUNv1_470104 | METUNv2_300105 | Aspartate aminotransferase (Transaminase A) (AspAT) | 1020.04 | 941.84 | −1.08 | 0.92 |
| METUNv1_470184 | METUNv2_300183 | Putative aspartate transaminase | 617.88 | 620.11 | 1.00 | 0.93 |
| METUNv1_750043 | METUNv2_570043 | Serine-pyruvate aminotransferase | 679.01 | 606.13 | −1.12 | 0.91 |
| Oxidative Phosphorylation | ||||||
| METUNv1_750182 | METUNv2_570182 | ATP synthase F0, A chain | 886.37 | 965.57 | 1.09 | 0.83 |
| METUNv1_750183 | METUNv2_570183 | ATP synthase F0, C chain | 1218.52 | 1365.89 | 1.12 | 0.93 |
| METUNv1_750184 | METUNv2_570184 | ATP synthase F0, B chain | 2528.92 | 2775.88 | 1.10 | 0.89 |
| METUNv1_750185 | METUNv2_570185 | ATP synthase delta chain | 2885.17 | 2564.77 | −1.12 | 0.86 |
| METUNv1_750186 | METUNv2_570186 | ATP synthase subunit alpha subunit | 8915.44 | 6780.46 | −1.31 | 0.89 |
| METUNv1_750187 | METUNv2_570187 | ATP synthase gamma subunit | 5294.58 | 4705.58 | −1.13 | 0.93 |
| METUNv1_750188 | METUNv2_570188 | ATP synthase beta subunit | 9593.01 | 6768.24 | −1.42 | 0.92 |
| METUNv1_750189 | METUNv2_570189 | ATP synthase epsilon subunit | 1784.40 | 1464.79 | −1.22 | 0.90 |
| METUNv1_770336 | METUNv2_590337 | NAD(P) transhydrogenase subunit alpha | 858.91 | 858.01 | −1.00 | 0.93 |
| METUNv1_770337 | METUNv2_590338 | NAD(P) transhydrogenase subunit beta | 399.38 | 455.25 | 1.14 | 0.92 |
| METUNv1_460126 | METUNv2_290122 | NADH-quinone oxidoreductase chain A | 156.74 | 148.38 | −1.06 | 0.93 |
| METUNv1_460127 | METUNv2_290123 | NADH-quinone oxidoreductase subunit B | 451.50 | 376.26 | −1.20 | 0.94 |
| METUNv1_460128 | METUNv2_290124 | NADH (or F420H2) dehydrogenase subunit C | 388.51 | 353.76 | −1.10 | 0.94 |
| METUNv1_460129 | METUNv2_290125 | NADH-ubiquinone oxidoreductase D subunit | 754.27 | 681.62 | −1.11 | 0.92 |
| METUNv1_460130 | METUNv2_290126 | NADH-quinone oxidoreductase subunit E | 207.95 | 211.51 | 1.02 | 0.92 |
| METUNv1_460131 | METUNv2_290127 | NADH-quinone oxidoreductase subunit F | 628.76 | 528.76 | −1.19 | 0.87 |
| METUNv1_460132 | METUNv2_290128 | NADH-quinone oxidoreductase subunit G | 1248.13 | 938.27 | −1.33 | 0.93 |
| METUNv1_460133 | METUNv2_290129 | NADH-quinone oxidoreductase subunit H | 520.13 | 381.75 | −1.36 | 0.93 |
| METUNv1_460134 | METUNv2_290130 | NADH-quinone oxidoreductase subunit I | 327.57 | 337.82 | 1.03 | 0.94 |
| METUNv1_460135 | METUNv2_290131 | NADH-quinone oxidoreductase subunit J | 131.50 | 118.13 | −1.11 | 0.88 |
| METUNv1_460136 | METUNv2_290132 | NADH-quinone oxidoreductase subunit K | 58.88 | 60.63 | 1.03 | 0.91 |
| METUNv1_460137 | METUNv2_290133 | NADH-quinone oxidoreductase subunit L | 637.25 | 465.50 | −1.37 | 0.83 |
| METUNv1_460138 | METUNv2_290134 | NADH-quinone oxidoreductase subunit M | 372.75 | 302.75 | −1.23 | 0.77 |
| METUNv1_460139 | METUNv2_290135 | NADH-ubiquinone oxidoreductase, chain N | 523.88 | 339.07 | −1.55 | 0.64 |
| METUNv1_660132 | METUNv2_480138 | Ferredoxin-NADP reductase | 522.14 | 879.52 | 1.68 | 0.69 |
| METUNv1_590030 | METUNv2_420029 | Ubiquinol-cytochrome c reductase complex, cytochrome c1 | 2503.55 | 1092.90 | −2.29 | 0.58 |
| METUNv1_590031 | METUNv2_420030 | Ubiquinol-cytochrome c reductase complex, cytochrome b | 2945.38 | 1365.76 | −2.16 | 0.81 |
| METUNv1_590032 | METUNv2_420032 | Ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) (RISP) | 3125.54 | 1240.80 | −2.52 | 0.84 |
| METUNv1_590008 | METUNv2_420008 | Peroxidase/catalase (Catalase-peroxidase) | 3075.82 | 1883.61 | −1.63 | 0.84 |
| METUNv1_670031 | METUNv2_490032 | Cytochrome c oxidase subunit 1 | 5577.29 | 4801.32 | −1.16 | 0.93 |
| METUNv1_670030 | METUNv2_490031 | Cytochrome c oxidase subunit 2 | 4105.55 | 3835.175 | −1.07 | 0.87 |
| METUNv1_670034 | METUNv2_490035 | Cytochrome c oxidase subunit 3 | 2746.54 | 2227.3 | −1.23 | 0.89 |
| METUNv1_670033 | METUNv2_490034 | Cytochrome c oxidase assembly protein | 1365.325 | 1525.035 | 1.12 | 0.93 |
| METUNv1_580051 | METUNv2_410050 | Hemin uptake protein hemP (fragment) | 1319.89 | 1517.79 | 1.15 | 0.68 |
| METUNv1_580052 | METUNv2_410051 | Bacterioferritin-associated ferredoxin | 930.37 | 739.50 | −1.26 | 0.80 |
| METUNv1_580053 | METUNv2_410052 | Bfr, Bacterioferritin | 1845.02 | 2568.53 | 1.39 | 0.77 |
* Each sample represents the average of two biological replicates. Values represent reads per kilobase of coding sequence per million (reads) mapped (RPKM).