Table 1.
The volume of Illumina HiSeq reads analysed with RepeatExplorer
| Species | 1C Genome size (Gb)a | Number of reads analysed | Genome proportion of analysed reads (%) | Genome proportion of 35S rDNAb (%) |
|---|---|---|---|---|
| Abies sibirica | 15.452 | 8,212,026 | 4.8 | 0.235 |
| Cycas revoluta | 13.399 | 6,927,500 | 4.7 | 1.095 |
| Ginkgo biloba | 11.492 | 5,402,020 | 4.2 | 0.468 |
| Gnetum gnemon | 3.785 | 2,102,778 | 5.0 | 0.845 |
| Fritillaria imperialis | 42.005 | 9,200,000 | 2.0 | 0.116 |
aThe values are from Plant DNA C-values database (Bennett and Leitch 2012)
bCoding region plus internal transcribed spacers (i.e. 18S-ITS1-5.8S-ITS2-26S)