Table 3.

Gene transcripts significantly differentially expressed between parental LG/J and SM/J inbred mouse strains

Chromosome	Gene	LG/J	SM/J	P value	Standard error	QTL interval	HC noncoding SNPs	correlation with calcification	P value
1	Aff3	0.048	−0.055	0.03	0.038	C1.1	14	0.56	0.02*
1	Gpatch2	0.008	−0.101	0.07	0.053	C1.5	14	0.39	0.11
6	Pon2	0.021	−0.054	0.06	0.036	C6.1	1	0.38	0.12
9	Uaca	0.019	−0.087	0.10	0.059	C9.1	1	0.18	0.48
9	Fam81a	0.057	−0.061	0.02	0.039	C9.2	2	0.46	0.06*
10	Syn3	0.092	−0.018	0.03	0.040	C10.1	13	0.43	0.08*
11	Copz2	0.075	−0.052	0.07	0.061	C11.1	2	−0.27	0.26
11	Skap1	0.073	−0.040	0.03	0.043	C11.1	156	0.17	0.51
11	Mrpl10	0.036	−0.055	0.04	0.035	C11.1	1	−0.14	0.58
11	Nfe2l1	0.035	−0.078	0.05	0.046	C11.1	6	−0.28	0.27
15	Ank	0.084	−0.017	0.09	0.050	C15.1	1	0.40	0.10*

QTL = quantitative trait locus; HC = highly conserved; SNP = single nucleotide polymorphism