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. 2016 Sep 6;7:12724. doi: 10.1038/ncomms12724

Table 2. Summary of the variables used as predictors of BMI in each of the models.

Model BMI Scores Activity Diet
Age and sex  (sex, age × sex, age2, age2 × sex, age3, age3 × sex)        
 East co-ordinate  
 East co-ordinate × age  
 East co-ordinate × sex  
 FTO (rs1421085)      
Activity variables  (‘Number of days/week walk 10+ minutes', ‘Number of days/week moderate physical activity 10+ minutes', ‘Number of days/week  vigorous physical activity 10+ minutes', and their interactions with age and sex)    
 Activity variables × FTO  
 Activity score    
 Activity score × FTO    
Diet variables  (‘cooked vegetable intake', ‘non-oily fish intake', ‘oily fish intake', ‘processed meat intake', ‘poultry intake', ‘beef intake', ‘lamb/mutton  intake', ‘pork intake', ‘cheese intake', ‘bread intake', ‘tea intake' and ‘frequency of added salt')    
 Diet variables × FTO  
 Diet score    
 Diet score × FTO    
Other variables  (‘age','alcohol intake frequency',‘sleep duration','sleep duration2', ‘current regular smoker (yes/no)',‘Townsend deprivation index', ‘Hours  watch TV', and their interactions with age and sex)        
 Other variables × FTO        
 Genotyping array      
 Genotyping array × FTO      

BMI, body mass index; CI, confidence interval; FTO, fat mass and obesity associated.

An ‘ × ' between two variables indicates an interaction effect. The ‘BMI' model is the model chosen by the cross-validation procedure in the non-genotyped sample (see Methods), and the ‘Scores' Model uses the coefficients fitted in the ‘BMI' model to construct the activity and diet scores. The ‘Activity' and ‘Diet' Models each have their relevant score variable replaced with the constituent variables of the score: ‘Activity score' replaced with ‘Activity variables' and so on. Note that to adjust for population structure in the models fitted in the genotyped samples, we added principal components in the British Sample, and we added random effects in a mixed model in the Diverse Sample (Methods).