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. 2016 Jul 12;33(10):2744–2758. doi: 10.1093/molbev/msw139

Table 1.

RDD Rates for the (A)n Motif.

Bin = 2; 3–5 RNA-seq Reads Bin = 5; 6–16 RNA-seq Reads Bin = 40; 49–102 RNA-seq Reads
Batch A Batch B Batch A Batch B Batch A Batch B
(A)5 <1.0e-9 [<1.0e-9, <1.0e-9] <1.0e-9 [<1.0e-9, 2.76e-4] <1.0e-9 [<1.0e-9, 3.29e-9] <1.0e-9 [<1.0e-9,6.86e-5] 1.87e-4 [<1.0e-9, 5.70e-4] <1.0e-9 [<1.0e-9, 4.29e-9]
(A)6 1.87e-3 [2.45e-4, 3.38e-3] 5.13e-4 [<1.0e-9, 2.01e-3] 6.45e-4 [<1.0e-9, <2.26e-3] 6.80e-4 [<1.0e-9, 2.17e-3] 1.89e-3 [<1.0e-9, 3.42e-3] 1.81e-3 [<1.0e-9, 4.97e-3]
(A)7 <1.0e-9 [<1.0e-9, 2.28e-3] 2.59e-3 [<1.0e-9, 7.59e-3] 3.26e-3 [<1.0e-9, 2.34e-3] 3.9e-3 [<1.0e-9, 2.83e-3] 7.36e-4 [<1.0e-9, 5.36e-3] 5.90e-3 [<1.0e-9, 1.33e-2]
(A)8 3.57e-3 [<1.0e-9, 1.48e-2] 2.68e-3 [<1.0e-9, 1.72e-2] 7.53e-3 [3.80e-3, <1.0e-9] 7.46e-3 [<1.0e-9, 1.14e-2] 3.76e-3 [<1.0e-9, 1.36e-2] <1.0e-9 [<1.0e-9, 8.12e-3]
(A)9 8.94e-3 [<1.0e-9, 2.28e-2] <1.0e-9 [<1.0e-9, <1.0e-9] 2.40e-2 [<1.0e-9, 1.90e-2] 1.57e-2 [<1.0e-9, 1.67e-2] 2.33e-2 [<1.0e-9, 7.34e-2] <1.0e-9 [<1.0e-9, 1.49e-2]
(A)10 <1.0e-9 [<1.0e-9, 6.55e-2] 1.15e-2 [<1.0e-9, 8.22e-2] 7.52e-2 [<1.0e-9, 6.85e-2] 4.95e-3 [<1.0e-9, 3.54e-2] 7.54e-3 [<1.0e-9, 5.93e-2] <1.0e-9 [<1.0e-9, 1.18e-2]

Note.—In each cell, the number outside the brackets is the point estimation, whereas the numbers inside the brackets are the 95% confidence intervals.