Skip to main content
. 2016 May 11;117(4):207–216. doi: 10.1038/hdy.2016.30

Table 3. Sensitivity of detection of changes in effective population size (Ne) for different demographic models.

Demographic model Initial Ne Change in Ne detected
Constant 100 No
  250 No
  500 No
  1000 No
Decline to 75% 100 Yes
  250 Yes
  500 No
  1000 No
Decline to 50% 100 Yes
  250 Yes
  500 Yes
  1000 No
Decline to 25% 100 Yes
  250 Yes
  500 Yes
  1000 Yes
Expansion to 2 × 100 Yes
  250 Yes
  500 Yes
  1000 No
Expansion to 5 × 100 Yes
  250 Yes
  500 Yes
  1000 Yes

Change in Ne was estimated using LinkNe for each model based on 1000 single-nucleotide polymorphism (SNP) loci and a sample size of 50 except where the change in Ne generated a population of <50 individuals (in which case all individuals were sampled). Change in Ne was detected when confidence intervals between estimates from the most distant past (14.3 generations) and those from the most recent past (1.01 generations) did not overlap.