Table 1. Results of PCR survey to identify gfap and vim sequences in the genomes of representative amphibian and other vertebrate species.
Common Name | Species | Class | Order | Family | vim Clones Sequenced | Successful Reads | vim | gfap Clones Sequenced | Successful Reads | gfap |
---|---|---|---|---|---|---|---|---|---|---|
Common Toad | Bufo bufo | Amphibia | Anura | Bufonidae | 13 | 13 | 6 | 12 | 11 | 0 |
African clawed frog | Xenopus laevis | Amphibia | Anura | Pipidae | 3 | 3 | 3 | 26 | 24 | 0 |
Carvalho’s Surinam toad | Pipa carvalhoi | Amphibia | Anura | Pipidae | 7 | 7 | 6 | 13 | 12 | 0 |
Mexican burrowing frog | Rhinophrynus dorsalis | Amphibia | Anura | Rhinophrynidae | 7 | 7 | 7 | 12 | 12 | 0 |
Iberian painted frog | Discoglossus galganoi | Amphibia | Anura | Discoglossidae | 8 | 7 | 7 | 11 | 11 | 0 |
Archey’s frog | Leiopelma archeyi | Amphibia | Anura | Leiopelmatidae | 24 | 13 | 9 | 12 | 12 | 0 |
Gold striped salamander | Chioglossa lusitanica | Amphibia | Caudata | Salamandridae | 12 | 10 | 7 | 25 | 12 | 11 |
Japanese giant salamander | Andrias japonicus | Amphibia | Caudata | Cryptobranchidae | 7 | 7 | 7 | 7 | 7 | 7 |
Tiny cayenne caecilian | Microcaecilia unicolor | Amphibia | Gymnophiona | Siphonopidae | 7 | 6 | 6 | 23 | 22 | 0 |
Koa Tao Island caecilian | Ichthyophis kohtaoensis | Amphibia | Gymnophiona | Ichthyophiidae | 7 | 7 | 7 | 8 | 7 | 0 |
Two-lined caecilian | Rhinatrema bivittatum | Amphibia | Gymnophiona | Rhinatre matidae | 11 | 9 | 6 | 8 | 8 | 8 |
Mouse | Mus musculus | Mammalia | Rodentia | Muridae | 3 | 3 | 3 | 6 | 6 | 6 |
Viviparous lizard | Zootoca vivipara | Sauropsida | Squamata | Lacertidae | 12 | 9 | 7 | 7 | 6 | 6 |
West African lungfish | Protopterus annectens | Sarcopterygii | Lepidosireniformes | Protopteidae | 13 | 13 | 0 | 9 | 7 | 7 |
Zebra fish | Daniorerio | Actinopterygii | Cypriniformes | Cyprinidae | 3 | 3 | 2 | 3 | 3 | 3 |
Marbled bichir | Polypterus palmas | Actinopterygii | Polypteriformes | Polypteridae | 7 | 6 | 6 | 11 | 10 | 7 |