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. Author manuscript; available in PMC: 2017 Nov 1.
Published in final edited form as: Neuroimage. 2016 Jul 15;141:542–555. doi: 10.1016/j.neuroimage.2016.07.020

Table 1.

Global tissue classes grouping structures with similar image intensity properties. GC-DG stands for granule cell layer of the dentate gyrus, and HATA for hippocampus-amygdala transition area.

Global class Structures
Gray matter Cerebral cortex, amygdala, parasubiculum, presubiculum, subiculum, CA1, CA2/3, CA4, GC-DG, HATA
White matter Cerebral white matter, fimbria
Cerebrospinal fluid Ventricle, hippocampal fissure
Dicencephalon Diencephalon
Thalamus Thalamus
Pallidum Pallidum
Putamen Putamen
Choroid plexus Choroid plexus