Table 1. Modification of HCV RNA IRES by alkylating derivatives of complementary oligodeoxyribonucleotides.
DNA derivative | Relative modification extent | Cross-linking site in HCV IRES | |
---|---|---|---|
with DNA helper | |||
DNA1-NHCH2RCl | 0.1 | 0.5 | C83 (N3) |
DNA2-NHCH2RCl | 0.2 | 0.6 | A73 (N1) |
Sequence of DNA derivative and complementary region in HCV IRES are pTAGACGCTTTCTGCGTGAAGA (61–81) for DNA1-NHCH2RCl and pTCTGCGTGAAGACAGTAG (55-72) for DNA2-NHCH2RCl.