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. 2016 Sep 19;11(9):e0162750. doi: 10.1371/journal.pone.0162750

Table 4. Death receptors and their ligands.

gene log2 FC (NC/CR) p q avg. signal
tumor necrosis factor α (TNF) -0.06 0.64 0.86 177
tumor necrosis factor α, natural antisense transcript (TNF-AS1) -0.66 <0.01 0.07 89
TNF receptor superfamily, member 1A (TNFRSF1A), TNFR1 +0.24 0.05 0.27 1406
TNF receptor superfamily, member 1B (TNFRSF1B), TNFR2 -0.33 0.06 0.29 1940
TNF receptor-associated factor 1 (TRAF1) -0.37 <0.01 0.06 1168
TNF receptor-associated factor 2 (TRAF2) -0.05 0.52 0.79 2218
baculoviral IAP repeat-containing 3, cIAP2 (BIRC3) -0.81 <0.01 0.05 538
BCL2-related protein A1 (BCL2A1) -1.18 0.01 0.09 825
amyloid beta (A4) precursor protein (APP) +0.55 0.01 0.12 2978
beta-site APP-cleaving enzyme 1, beta-secretase (BACE1) +0.34 0.01 0.09 121
beta-site APP-cleaving enzyme 2, theta-secretase (BACE2) +0.64 0.03 0.19 1239
TNF receptor superfamily, member 21, DR6 (TNFRSF21) +0.59 <0.01 0.03 4991

Negative log2 FC values indicate higher expression in tissues from persistently infected FMDV carriers (CR) compared to non-carriers (NC). All p- and q-values that met the established significance criteria are marked in bold. (p: unadjusted p-value at gene level, q: transcriptome-wide p-value after Benjamini-Hochberg adjustment, avg. signal: average intensity of this probe across all arrays)