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. Author manuscript; available in PMC: 2017 Oct 1.
Published in final edited form as: Neurosurg Clin N Am. 2016 Aug 10;27(4):465–472. doi: 10.1016/j.nec.2016.05.006

Table 1.

Biospecimen sources for application of metabolomics in TBI research

Biospecimen Pros Cons
Tissue The most direct relevance to the injury, can compare injured hemisphere to uninjured hemisphere Not applicable to clinical research; rarely would tissue be available and unclear how a metabolomics study could be designed
Blood Easily obtained Systemic vs. Brain
Arteriovenous differences Systemic minus cerebral metabolites Jugular catheter is invasive
Cerebrospinal fluid Drained as a treatment for high intracranial pressure, would otherwise be discarded Commonly available with severe injuries; invasive to obtain otherwise
Urine Easily obtained Concentration of metabolites a function of systemic dilution; within sample normalization is common
Cerebral microdialysate From the cerebral tissue, as close to the source as possible Low volumes obtained leading to pooling biofluid over a large periods of time; perfusate and not directly sampling extracellular fluid