Table 2.
miR825 and miR825* target predication
| miRNAs | Target gene | Symbols | Score | Alignment |
|---|---|---|---|---|
| 825* | AT5G38850 | Disease resistance protein (TIR-NBS-LRR class) | 1 |
|
| AT4G14370 | Disease resistance protein (TIR-NBS-LRR class) family | 1.5 |
|
|
| AT5G40920 | pseudogene, disease resistance protein (TIR-NBS-LRR class) | 2.5 |
|
|
| AT1G63750 | Disease resistance protein (TIR-NBS-LRR class) family | 2.5 |
|
|
| AT4G11170 | Disease resistance protein (TIR-NBS-LRR class) family | 2.5 |
|
|
| AT1G63740 | Disease resistance protein (TIR-NBS-LRR class) family | 2.5 |
|
|
| AT1G63730 | Disease resistance protein (TIR-NBS-LRR class) family | 2.5 |
|
|
| AT4G08450 | Disease resistance protein (TIR-NBS-LRR class) family | 3 |
|
|
| AT5G41550 | Disease resistance protein (TIR-NBS-LRR class) family | 3 |
|
|
| AT5G51630 | Disease resistance protein (TIR-NBS-LRR class) family | 3 |
|
|
| AT5G40910 | Disease resistance protein (TIR-NBS-LRR class) family | 3 |
|
|
| AT3G04220 | Disease resistance protein (TIR-NBS-LRR class) family | 3 |
|
|
| AT5G40060 | Disease resistance protein (NBS-LRR class) family | 3 |
|
|
| AT1G66090 | Disease resistance protein (TIR-NBS class) | 3 |
|
|
| AT5G18360 | Disease resistance protein (TIR-NBS-LRR class) family | 3 |
|
|
| 825 | AT5G55970 | RING/U-box superfamily protein | 4.5 |
|
| AT5G44940 | F-box/RNI-like superfamily protein | 4.5 |
|
Prediction targets of miR825 and miR825* are listed, with gene ID, predicted function, and base-paring patterns shown. Real-time PCR validated targets of miR825 and miR825* are highlighted in red. A “:” represents a perfect match; a “.” represents a wobble (G: U pairs); a “·”(a space) represents an imperfect match. Note: Prediction targets of miR825 and miR825* are listed, with gene ID, predicted function, and base-paring patterns shown. A “:” represents a perfect match; a “.” represents a wobble (G: U pairs); a “·”(a space) represents an imperfect match.