Table 4.
Correlation between normalised GA‐map signal data and MiSeq Illumina sequence data (97% sequence identity) for 188 healthy and IBS samples
Taxonomic group | Correlation coefficient (r)a | P‐value |
---|---|---|
Mycoplasma hominis b | −0.05 | 0.50 |
Ruminococcus albus/bromii c | 0.31 | <0.001 |
Bacteroides fragilis c | 0.38 | <0.001 |
Streptococcus sanguinis/thermophilus c | 0.49 | <0.001 |
Phascolarctobacterium | 0.72 | <0.001 |
Faecalibacterium prausnitzii | 0.75 | <0.001 |
Streptococcus thermophilus | 0.78 | <0.001 |
Akkermansia | 0.79 | <0.001 |
Eubacterium | 0.79 | <0.001 |
Megashera/dialister | 0.83 | <0.001 |
Ruminococcus gnavus | 0.86 | <0.001 |
Dialister | 0.88 | <0.001 |
Alistipes | 0.90 | <0.001 |
Bifidobacterium | 0.90 | <0.001 |
Shigella/Escherichia | 0.93 | <0.001 |
Lactobacillus/Pediococcus | 0.94 | <0.001 |
Correlation coefficients were determined for the closest matching taxonomic bins.
Mycoplasma only identified in one sample by MiSeq Illumina sequencing.
Illumina sequencing did not enable selective detection of species.