Skip to main content
. 2016 Sep 20;11(9):e0162437. doi: 10.1371/journal.pone.0162437

Table 1. PCR and pyrosecquencing primer.

NR3C1 SNPs Forward Primer Reverse Primer Pyrosequencing Primer TA PCR Amplicon lenght
ER23/23EK Bio 5’-GAAGAAAACCCCAGCAGTGTG -3’ 5’-GACGCAGAAACCTTCACAGTAGCT -3’ 5’-GGTTTTATAGAAGTCCATCA-3’ 61°C 98bp
N363S 5’- ACAGCAGGATCAGAAGCCTATTT -3’ Bio 5’-AGTTCAGAGTCCCCAGAGAAGTC -3’ 5’- CCGTTGGTTCCGAAA -3’ 57°C 119bp
BclI 5’- AGGTCTTGCTCACAGGGTTCTTG -3’ Bio 5’- GAACTTGCAGGAACATTTGAACG -3’ 5’- AAGTAGACAAGTTATGTCTG -3’ 58°C 128bp

Bio: the 5’ biotin modification of the PCR primer is required for the DNA single strand DNA capture in the Pyrosequencing assay protocol.

TA: annealing temperature for Polimerase Chain Reaction