Table 2. Nucleotide substitution rates and divergence times over 12 years for the VP1 gene of GII.4 NoV variants in China(n = 174, 1623 nt)a.
Molecular clock | Nucleotide substitution rate | TMRCA by: | |
---|---|---|---|
(10−3 substitutions/site/year) | No. of year | Date (range) | |
Strict clock | 4.74 (4.12, 5.41) | 19.6 (17.9, 21.4) | 1994.4 (1978.4, 1996.1) |
UCLN | 6.99 (5.54, 8.59) | 13.4 (12.4, 14.3) | 2000.6 (1999.7, 2001.6) |
UCED | 7.68 (6.14, 9.29) | 13.2 (12.4, 14.1) | 2000.8 (1999.9, 2001.6) |
aThe nucleotide substitution rate is the mean rate for the three individual determinations. UCLN, uncorrelated log-normal clock. UCED, uncorrelated exponential deviation clock. TMRCA, time to most recent common ancestor. Values in parentheses are 95% HPDs.