Table 3. Variation in repeat length among genic globe artichoke perfect and imperfect SSRs.
SSR Type | Perfect motif | Imperfect motif | ||||
---|---|---|---|---|---|---|
Count | % | Density (SSRs/Mbp) | Count | % | Density (SSRs/Mbp) | |
Mono- | 108 | 2.3% | 0.74 | 112 | 1.7% | 0.76 |
Di- | 1,020 | 21.4% | 6.96 | 1,243 | 18.9% | 8.48 |
Tri- | 2,614 | 54.9% | 17.84 | 2,794 | 42.4% | 19.07 |
Tetra- | 327 | 6.9% | 2.23 | 462 | 7.0% | 3.15 |
Penta- | 151 | 3.2% | 1.03 | 493 | 7.5% | 3.37 |
Hexa- | 541 | 11.4% | 3.69 | 1,479 | 22.5% | 10.10 |
Total/mean | 4,761 | 100.0% | 32.50 | 6,583 | 100.0% | 44.94 |