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. Author manuscript; available in PMC: 2017 Sep 1.
Published in final edited form as: Proteins. 2016 Jun 15;84(Suppl 1):260–281. doi: 10.1002/prot.25048

Table III.

Percent increase in GDT-HA of model 1 of all targets refined by top six groups.

Targets FEIG Seok Seok-refine Kiharalab LEE Schroderlab

TR217 0.18 2.19 −3.11 −2.56 −3.83 −7.49

TR228 1.59 6.41 3.73 −4.29 −3.75 7.47
Helices

TR274 −1.40 −4.22 −3.29 −6.11 3.74 −11.27

TR280 10.98
Nter moved
8.77
Nter moved
7.46
Nter strand
2.20 8.77
Nter strand
20.19
Nter moved

TR283 0.02 2.34 2.73 6.21 0.41 −3.09

TR759 24.11 −2.67
Nter strand
6.24
Nter strand
10.71 2.67 16.96
Sheet

TR760 0.43 3.24 0 1.94 −7.53 −10.98

TR762 −6.18 −1.65 −6.45 −2.61 −1.79 −10.85

TR765 29.66
Helices
0.54 1.10 10.44 9.34 28.56
Helices

TR768 8.10 2.96 5.13 2.42 12.15 7.01

TR769 1.72 −0.45 −0.01 9.03 0.85 10.76

TR772 2.39 −0.70 0.72 −1.67 −0.22 −5.02

TR774 5.54 −5.08 −5.08 0.45 −0.84 −6.79

TR776 8.35 0.71 0.17 5.50 3.54 4.43

TR780 8.22 6.77 5.80 6.29 11.60 9.19

TR782 12.89 1.39 −1.39 2.79 3.47 11.49

TR783 8.51 1.77 1.41 4.44 2.49 6.39

TR786 7.74 −1.18 −5.39 −4.70 4.68 10.33

TR792 27.57
Helices
−2.16 −2.16 −0.53 0 14.06

TR795 8.57 4.90 3.67 6.12 2.45 6.74

TR803 11.94 0 4.34 4.34 7.60 −6.00

TR810 2.00 4.82 8.04 2.81 −3.41 4.42

TR811 −6.24 2.16 2.43 −0.27 6.23 −8.40

TR816 7.79 3.53 1.40 3.54 3.54 16.31
Helix & Loop

TR817 −14.36 1.56 −3.84 0.28 −9.95 −4.97

TR821 23.60
Helices
3.59 6.18 7.99 −4.20 28.39
Helices

TR822 23.75
Sheets
2.88 10.07 8.66 23.75
Sheets
19.45
Sheets

TR823 −21.8 5.88 2.51 8.61 2.92 14.49

TR827 3.32 3.32 8.08 3.69 14.33 18.39

TR828 −4.75 −7.09 −4.75 1.76 −10.05 −9.48

TR829 1.46 −5.84 −2.19 3.63 2.19 −2.93

TR833 2.23 1.10 4.07
C-ter refined
3.34 −23.41 −5.95

TR837 −3.31 2.83 6.59 2.37 7.07 −1.41

TR848 3.68 −2.46 −3.39 −8.93 −0.30 10.15

TR854 10.03 0.59 −5.93 0.57 −12.42 −0.59

TR856 −1.01 1.52 0.25 −0.49 −8.57 −15.14

TR857 10.66 7.62 6.82 8.38 3.78 3.78

Where significant improvements in elements of secondary structure were observed in the heat maps, this is notated below the score. For target TR822, the starting structure did not contain a proper β sheet, while several groups were able to create one during refinement.