Table 5.
Proteins with Potential PPI Binding Sites Identified from Search Against PrePPI
| Symbol | Name | Binding site | Predicted PPI | ||
|---|---|---|---|---|---|
|
| |||||
| Model | Symbol | Name | |||
| AK3 | GTP:AMP phosphotransferase AK3, mitochondrial | 1ZD8A2 | 2BWJ | AK5 | Adenylate kinase isoenzyme 5 |
| ANK1 | Ankyrin-1 | 1N11A3 | 2JAB | ILK | Integrin-linked protein kinase |
| CHN1 | N-chimaerin | 3CXLA3 | 1OW3 | RAC1 | Ras-related C3 botulinum toxin substrate 1 |
| HOGA1 | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial | 3S5OA1† | 3DAQ | HOGA1 | 4-hydroxy-2-oxoglutarate aldolase, mitochondrial |
| HPD | 4-hydroxyphenylpyruvate dioxygenase | 3ISQA1† | 1SQI | HPDL | 4-hydroxyphenylpyruvate dioxygenase-like protein |
| HPD | 4-hydroxyphenylpyruvate dioxygenase | 3ISQA5 | 1SQI | HPDL | 4-hydroxyphenylpyruvate dioxygenase-like protein |
| LCN | Lipocalin-1 | 3EYCA1† | 2F91 | OVCH1 | Ovochymase-1 |
| NCS1 | Neuronal calcium sensor 1 | 1G8IB1 | 1AUI | PPP3CA | Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform |
| NCS1 | Neuronal calcium sensor 1 | 1G8IB2† | 1AUI | PPP3CA | Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform |
| RAP1GAP | Rap1 GTPase-activating protein 1 | 1SRQA1 | 3BRW | RAP1A | Ras-related protein Rap-1A |
| RHCG | Ammonium transporter Rh type C | 3HD6A1 | 2NUU | RHAG | Ammonium transporter Rh type A |
| RHCG | Ammonium transporter Rh type C | 3HD6A4 | 2NUU | RHAG | Ammonium transporter Rh type A |
| RHCG | Ammonium transporter Rh type C | 3HD6A5 | 2NUU | RHAG | Ammonium transporter Rh type A |
| SHMT2 | Serine hydroxymethyltransferase, mitochondrial | 3OU5A1 | 3GBX | SHMT2 | Serine hydroxymethyltransferase, mitochondrial |
| STXBP2 | Syntaxin-binding protein 2 | 4CCAA2 | 3C98 | STX1A | Syntaxin-1A |
| THEM5 | Acyl-coenzyme A thioesterase THEM5 | 4AE7A1 | 1Q4T | THEM4 | Acyl-coenzyme A thioesterase THEM4 |
| ZBTB32 | Zinc finger and BTB domain-containing protein 32 | 3M5BB1 | 3BIM | BCL6 | B-cell lymphoma 6 protein |
The binding site is druggable (DS ≥ 1.0)