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. Author manuscript; available in PMC: 2017 Oct 20.
Published in final edited form as: Mol Biosyst. 2016 Jul 25;12(10):3067–3087. doi: 10.1039/c6mb00231e

Table 5.

Proteins with Potential PPI Binding Sites Identified from Search Against PrePPI

Symbol Name Binding site Predicted PPI

Model Symbol Name
AK3 GTP:AMP phosphotransferase AK3, mitochondrial 1ZD8A2 2BWJ AK5 Adenylate kinase isoenzyme 5
ANK1 Ankyrin-1 1N11A3 2JAB ILK Integrin-linked protein kinase
CHN1 N-chimaerin 3CXLA3 1OW3 RAC1 Ras-related C3 botulinum toxin substrate 1
HOGA1 4-hydroxy-2-oxoglutarate aldolase, mitochondrial 3S5OA1 3DAQ HOGA1 4-hydroxy-2-oxoglutarate aldolase, mitochondrial
HPD 4-hydroxyphenylpyruvate dioxygenase 3ISQA1 1SQI HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein
HPD 4-hydroxyphenylpyruvate dioxygenase 3ISQA5 1SQI HPDL 4-hydroxyphenylpyruvate dioxygenase-like protein
LCN Lipocalin-1 3EYCA1 2F91 OVCH1 Ovochymase-1
NCS1 Neuronal calcium sensor 1 1G8IB1 1AUI PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform
NCS1 Neuronal calcium sensor 1 1G8IB2 1AUI PPP3CA Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform
RAP1GAP Rap1 GTPase-activating protein 1 1SRQA1 3BRW RAP1A Ras-related protein Rap-1A
RHCG Ammonium transporter Rh type C 3HD6A1 2NUU RHAG Ammonium transporter Rh type A
RHCG Ammonium transporter Rh type C 3HD6A4 2NUU RHAG Ammonium transporter Rh type A
RHCG Ammonium transporter Rh type C 3HD6A5 2NUU RHAG Ammonium transporter Rh type A
SHMT2 Serine hydroxymethyltransferase, mitochondrial 3OU5A1 3GBX SHMT2 Serine hydroxymethyltransferase, mitochondrial
STXBP2 Syntaxin-binding protein 2 4CCAA2 3C98 STX1A Syntaxin-1A
THEM5 Acyl-coenzyme A thioesterase THEM5 4AE7A1 1Q4T THEM4 Acyl-coenzyme A thioesterase THEM4
ZBTB32 Zinc finger and BTB domain-containing protein 32 3M5BB1 3BIM BCL6 B-cell lymphoma 6 protein

The binding site is druggable (DS ≥ 1.0)