Table 4.
Before Minimization | ||||||
---|---|---|---|---|---|---|
Slopes | Correlations | RMSD (kcal/mol) | ||||
TRADITIONAL | GAUSSIAN | TRADITIONAL | GAUSSIAN | TRADITIONAL | GAUSSIAN | |
CHARMM vs. AMBER |
1.05 | 0.78 | 0.819 | 0.729 | 40.71 | 88.89 |
CHARMM vs. OPLSAA |
1.07 | 0.43 | 0.815 | 0.731 | 43.18 | 92.93 |
AMBER vs. OPLSAA |
1.00 | 0.54 | 0.978 | 0.988 | 15.47 | 81.10 |
After Minimization for 500 steps | ||||||
Slopes | Correlations | RMSD (kcal/mol) | ||||
TRADITIONAL | GAUSSIAN | TRADITIONAL | GAUSSIAN | TRADITIONAL | GAUSSIAN | |
CHARMM vs. AMBER |
1.30 | 0.76 | 0.776 | 0.737 | 50.81 | 78.28 |
CHARMM vs. OPLSAA |
0.91 | 0.53 | 0.800 | 0.736 | 27.06 | 77.07 |
AMBER vs. OPLSAA |
0.62 | 0.69 | 0.908 | 0.983 | 40.51 | 49.66 |