Table 1. Origin and culture conditions of Bolidophyceae strains.
| ID | Species | Previous genus assignment | Strain name | Other name | Ocean origin | Depth of isolation (m) | Growth temperature (°C) | 18S rRNA | ITS rRNA | 16S rRNA | rbcL | nadH1 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NIES-2565 | Triparma laevis f. inornata | Triparma | TOY-0807 | Western Pacific Ocean | 80 | 5 | AB546639 | This study | LN735526 | AB546640 | This study | |
| NIES-3699 | Triparma laevis f. longispina | TLLOY-0907 | Western Pacific Ocean | 50 | 5 | This study | This study | LN735530 | This study | This study | ||
| NIES-3701 | Triparma strigata | TSOY-0907 | Western Pacific Ocean | 50 | 5 | This study | This study | LN735531 | This study | This study | ||
| NIES-3700 | Triparma aff. verrucosa | TVOY-0907 | Western Pacific Ocean | 50 | 5 | This study | This study | LN735532 | This study | This study | ||
| RCC205 | Triparma pacifica | Bolidomonas | OLI 31 SE3 | CCMP1866, NIES2682 | Equatorial Pacific Ocean | 15 | 20 | HQ912557, AF123595 | This study | LN735325 | AF372696 | |
| RCC206 | Triparma pacifica | Bolidomonas | OLI 31 SC-A | Equatorial Pacific Ocean | 15 | 20 | This study | This study | LN735329 | This study | ||
| RCC208 | Triparma eleuthera | Bolidomonas | OLI 120 SD-A | Equatorial Pacific Ocean | 5 | 20 | AF167154 | This study | LN735332 | AF333978 | This study | |
| RCC210 | Triparma eleuthera | Bolidomonas | OLI 46 SE-A | Equatorial Pacific Ocean | 15 | 20 | AF167153 | This study | LN735333 | This study | This study | |
| RCC212 | Triparma eleuthera | Bolidomonas | OLI 41 SA-A | Equatorial Pacific Ocean | 15 | 20 | AF167155 | This study | LN735334 | AF333979 | This study | |
| RCC216 | Triparma pacifica | Bolidomonas | OLI 94 SCH | Equatorial Pacific Ocean | 5 | 20 | This study | This study | LN735335 | This study | ||
| RCC238a | Triparma mediterranea | Bolidomonas | MIN 129–20m Aa | MIN B11E5, CCMP1867, NIES-2681 | Mediterranean Sea | 20 | 20 | AF123596, HQ710555 | AY702144 | AF333977 | ||
| RCC239 | Triparma mediterranea | Bolidomonas | MIN 129–20m Ab | MIN B11E7 | Mediterranean Sea | 20 | 20 | This study | This study | LN735367 | This study | |
| RCC1657 | Triparma sp. | MICROVIR 3K_0 | NIES-3369 | North Sea | 10 | 15 | KF422625 | This study | LN735273 | This study | ||
| RCC1730 | Triparma eleuthera | SOLAS_F | NIES-3370 | Atlantic Ocean | 5 | 20 | This study | This study | LN735286 | This study | This study | |
| RCC2347 | Triparma eleuthera | BOUM117–22 | NIES-3371 | Mediterranean Sea | 25 | 22 | KF422629 | This study | LN735356 | This study | This study |
Abbreviations: ITS, Internal Transcribed Spacer; NIES, National Institute of Environmental Sciences Collection; RCC, Roscoff Culture Collection.
Strains are available from the RCC (http://www.roscoff-culture-collection.org/) or the NIES culture collection (http://mcc.nies.go.jp/). Lines in bold correspond to novel strains.
a
This strain has been contaminated and is not available anymore from the RCC collection.