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. 2016 Sep 21;11(9):e0161946. doi: 10.1371/journal.pone.0161946

Table 4. Common MAP and MAA Arcs and Mechanistic Genes in Tight Junction Pathway.

Parent Gene Parent Gene Description Child cause Childgene MAP Norm. Arc Wt. MAA Norm. Arc Wt. Abs. Val. Difference Correl. Direction MAP 1st Mechanistic Time MAP Parent Gene Score MAP Child Gene Score MAA 1st Mechanistic Time MAA Parent Gene Score MAA Child Gene Score
PARD3 par-3 partitioning defective 3 homolog (C. elegans) JAM3 junctional adhesion molecule 3 0.27 0.56 0.29 positive t = 30 0 2.62 t = 720 -2.9 0
ACTB actin, beta MYL12A myosin, light chain 12A, regulatory, non-sarcomeric 0.2 0.38 0.18 positive t = 720 0 2.12 t = 30 -3.72 0
CLDN7 claudin 7 MPDZ multiple PDZ domain protein -0.42 -0.2 0.33 negative t = 60 -3.17 0 T = 480 2.4 0.81
TJP1 tight junction protein 1 ACTG1 actin, gamma 1 0.39 0.26 0.13 positive t = 60 0 2.04 t = 60 0.74 2.57
ACTG1 actin, gamma 1 MYH9 myosin, heavy chain 9, non-muscle 0.56 0.45 0.11 positive t = 60 2.04 -1.37 t = 60 2.57 -1.55
CDC42 cell division cycle 42 (GTP binding protein, 25kDa) PARD6B par-6 partitioning defective 6 homolog beta (C. elegans) 0.74 0.44 0.3 positive t = 720 -3.53 -0.81 t = 240 2.53 0
CLDN7 claudin 7 TJP3 tight junction protein 3 (zona occludens 3) 0.6 0.23 0.37 positive t = 60 -3.17 -1.81 t = 480 2.4 0
CDK4 cyclin-dependent kinase 4 CSDA cold shock domain protein A -0.36 -0.2 0.16 negative t = 30 -2.37 -0.11 t = 240 0 -2.7
CSNK2B casein kinase 2, beta polypeptide no child node 0 0 0 positive t = 30 -4.07 0 t = 30 -2.94 0
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa no child node 0 00 positive t = 30 -2.27 0 t = 240 2.06 0
AKT2 v-akt murine thymoma viral oncogene homolog 2 no child node 0 0 0 positive t = 60 2.08 0 t = 720 2.47 0
PRKCZ protein kinase C, zeta no child node 0 0 0 positive t = 240 2.72 0 t = 30 -2.75 0
EPB41L1 erythrocyte membrane protein band 4.1-like 1 no child node 0 0 0 positive t = 30 2.03 0 t = 240 -2.36 0

Tight Junction Pathway Bayesian Model Interrogation Results of Gene-to-Gene Relationships and Mechanistic Genes found in common between the MAP and MAA conditions. See text for description of interrogation methods.