Table 3. OIR-responsive miRNAs and Disease-Associated Altered Expression of Genes Encoding Pertinent Experimentally Verified Targets.
miRNA ID |
Verified Human Targets* | miRNA Target Genes with Altered Expression in Diseased Human Retinal Tissue24,25 |
|||||
---|---|---|---|---|---|---|---|
PDR | NV AMD vs. No AMD |
||||||
Mouse | Human | PDR vs. No PDR | Active vs. Inactive FVM | RPE/Choroid | Neural Retina | ||
Up-regulation in OIR | |||||||
mmu-miR-351-5p | hsa-miR-125a-5p# | 32 | CDK1NA, CLEK5A | CD34 | N/A | ARID3B, ERRB2 | |
mmu-miR-762 | hsa-miR-762 | 2 | N/A | N/A | N/A | N/A | |
mmu-miR-210-3p | hsa-miR-210-3p | 60 | COL4A2 | N/A | MNT | N/A | |
mmu-miR-145a-5p | hsa-miR-145-5p | 164 | CDH2, CDK6, CDKN1A, COL5A1, SERPINE1, NDRG2 | ANGPT2, ETS1, SOX2 | CTGF, ITGB8, MEST1, MMP1 | CLINT1, MYO5A | |
mmu-miR-486a-5p | hsa-miR-486-5p | 4 | N/A | N/A | N/A | N/A | |
mmu-miR-339-5p | hsa-miR-339-5p | 3 | N/A | N/A | N/A | N/A | |
mmu-miR-34c-5p | hsa-miR-34c-5p | 44 | N/A | SOX2 | N/A | N/A | |
mmu-miR-155-5p | hsa-miR-155-5p | 294 | N/A | DOCK1, ETS1, IL17RB | NOVA1 | CKAP5, FADD, FAM177A1, MYO10 | |
Down-regulation in OIR | |||||||
mmu-miR-129-5p | hsa-miR-129-5p | 15 | CDK6 | N/A | ABCC5 | SOX4 | |
mmu-miR-150-5p | hsa-miR-150-5p | 34 | N/A | NOTCH3, IGF2 | IGF1 | N/A | |
mmu-miR-375-3p | hsa-miR-375 | 39 | N/A | RASD1 | N/A | ERRB2 | |
mmu-miR-203-3p | hsa-miR-203a-3p | 63 | CDK6 | N/A | N/A | N/A | |
mmu-miR-129-2-3p | hsa-miR-129-2-3p | 4 | CDK6 | N/A | N/A | SOX4 | |
mmu-miR-449a-5p | hsa-miR-449a | 30 | CDK6, LEF1 | N/A | N/A | N/A | |
mmu-miR-383-5p | hsa-miR-383-5p | 8 | IRF1 | N/A | N/A | N/A | |
mmu-miR-1907 | N/A | N/A | N/A | N/A | N/A | N/A | |
mmu-miR-409-3p | hsa-miR-409-3p | 8 | N/A | N/A | FGG | N/A |
AMD, age-related macular degeneration; FVM, fibrovascular membrane; N/A, not applicable; NV, neovascular; PDR, proliferative diabetic retinopathy.
*Experimentally validated miRNA human target interactions from qPCR, luciferase reporter assays, and Western blots were obtained from mirTarBase 6.1.
#Hsa-miR-125a-5p contains identical seed sequence region as mmu-miR-351-5p, hence it was analyzed as the human homolog.