Table 1. Assembly statistics and repeat content of rice and non-rice Magnaporthe isolates.
| Host (Common Name) | Rice | Finger millet | Foxtail millet | Buffel grass | |||||
|---|---|---|---|---|---|---|---|---|---|
| Host (Scientific Name) | Oryza sativa | Eleusine coracana | Setaria italica | Cenchrus celiaris | |||||
| Isolate code | MG01* | MG10 | MG02 | MG03 | MG12 | MG04 | MG05 | MG08 | MG07 |
| Tissue | Leaf | Leaf | Neck | Leaf | Leaf | Neck | Leaf | Leaf | Leaf |
| Illumina PE reads (millions) | 32 | 19 | 45 | 22 | 20 | 123 | 22 | 43 | 41 |
| Sequence depth (X) | 81 | 48 | 112 | 55 | 50 | 300 | 55 | 107 | 102 |
| No. of scaffolds | 17137 | 7336 | 19061 | 7872 | 8202 | 5972 | 5156 | 10135 | 12250 |
| Largest scaffold length (nts) | 186507 | 193896 | 388050 | 141810 | 106366 | 235178 | 124142 | 143558 | 110300 |
| N50 (nts) | 24781 | 27650 | 57789 | 25948 | 20755 | 51432 | 25058 | 25042 | 20306 |
| Assembly size (Mb) | 41 | 39 | 41 | 41 | 41 | 40 | 41 | 40 | 44 |
| Number of genes | 13494 | 13078 | 13448 | 13223 | 13081 | 12736 | 13235 | 13252 | 13252 |
| Repeat content (%) | 5.51 | 3.09 | 6.79 | 4.84 | 4.73 | 4.01 | 6.9 | 7.5 | 5.31 |
* Gowda et al. (2015)