Skip to main content
. 2016 Jul 11;291(39):20283–20294. doi: 10.1074/jbc.M116.730697

TABLE 1.

Rate constants for the kinesin-5 chemomechanical cycle

State Rate constant Description Source Experiment Units
1-2 kbind Bound-head Mt on-rate Fig. 4c 4.2 ± 0.2 μm−1 s−1
2-1 kunbind Bound-head Mt off-rate Fig. 2f 0.77 ± 0.06 s−1
2-3 koffADP Bound-head ADP off-rate Fig. 1b 37.8 ± 5.3 s−1
3-4 konATP Bound-head ATP on-rate Fig. 1e 1.5 ± 0.2 μm−1 s−1
4-5 khyd Hydrolysis rate Deriveda 250 (79, 414)b s−1
5-1 kunbindDP Mt off-rate at ADP-Pi state Deriveda 21.3 ± 4.5 s−1
5-6 kattach Front-head attachment rate Deriveda 476 (79, 1073)b s−1
6-7 koff,FHADP Front-head ADP off-rate Fig. 4a 75 ± 8 s−1
7-6 kon,FHADP Front-head ADP on-rate Fig. 4a 2.1 ± 0.8 μm−1 s−1
6-2 kdetach Trailing-head detachment rate Derivedc 10.1 ± 0.3 s−1
7-3 kdetach
8-4 kdetach
7-8 kon,FHATP Front-head ATP on-rate Fig. 4b 0.28 ± 0.08 μm−1 s−1
8-7 koff,FHATP Front-head ATP off-rate Fig. 4b 92 ± 2 s−1

a In Fig. 1, c and d, 1/kcat − 1/ koffADP = 1/khyd + 1/ kunbindDP = 51 ± 10 ms. In Figs. 3c and 4a, 1/kmaxATP/HS − 1/kFH,offADP = 1/khyd + 1/kattach = 5.6 ± 1.6 ms. In Fig. 2c, processivity was constrained by kattach/kunbindDP = 22. These three equations give the solution set of the three unknowns. HS, half-site experiment.

b 95% confidence interval with truncated gaussian model. Lower bound: experimental constraints in a; upper bound: one-tailed, α = 5%.

c In Figs. 2d and 3c, 1/ kstepATP = 1/kmaxATP/HS + 1/kdetach + 1/kFH,onATP[ATP], where 1/ kFH,onATP[ATP] is negligible at high [ATP].