TABLE 2.
Agp1 (5I5L)a | DrBphP (4Q0J) | RpBphP2 (4R6L) | |
---|---|---|---|
Superpositioning of PAS-GAF monomers (upper right) and dimers (lower left) | |||
Agp1 (5I5L) | 1.27b (270)c | 1.38 (277)/1.29 (261)d | |
DrBphP (4Q0J) | 2.87 (536) | 1.47 (276)/1.16 (258) | |
RpBphP2 (4R6L) | 2.28 (536) | 2.72 (521) | |
Angles formed between the C-terminal helical segments of the GAF domains within a dimer | |||
Agp1 (5I5L) | 42° (289–304)e | ||
DrBphP (4Q0J) | 50° (299–314) | ||
RpBphP2 (4R6L) | 47° (294–309) | ||
Surface area (Å2) buried at the dimer interface | |||
Agp1 (5I5L) | 1193 | ||
DrBphP (4Q0J) | 1350 | ||
RpBphP2 (4R6L) | 1313 |
a PDB code is shown in parentheses.
b r.m.s.d. values are in Å.
c Number of Cα atoms used in structural alignment is shown in parentheses.
d Data shown are with first (chain A) and second copy (chain B) of the polypeptide chain.
e Range of residues used to define the helix axis is shown in parentheses.