TABLE 1 .
Metadata for Salmonella Typhimurium strains isolated from humans and food between 1983 and 2013 in Brazil
| CFSAN no.a | Isolate name | WGS accession no.b | Source | Year of isolation | State |
|---|---|---|---|---|---|
| CFSAN033848 | STm01 | LVHC00000000 | Human feces | 1983 | SP |
| CFSAN033851 | STm04 | LVGZ00000000 | Human feces | 1983 | SP |
| CFSAN033852 | STm05 | LVGY00000000 | Human feces | 1983 | SP |
| CFSAN033859 | STm12 | LUJG00000000 | Human feces | 1984 | SP |
| CFSAN033865 | STm18 | LVGN00000000 | Human feces | 1985 | SP |
| CFSAN033866 | STm19 | LVGM00000000 | Human feces | 1986 | SP |
| CFSAN033875 | STm28 | LUJE00000000 | Human feces | 1988 | SP |
| CFSAN033876 | STm29 | LVGE00000000 | Human feces | 1989 | SP |
| CFSAN033877 | STm30 | LVGD00000000 | Human feces | 1990 | SP |
| CFSAN033878 | STm31 | LUJD00000000 | Human feces | 1991 | SP |
| CFSAN033881 | STm34 | LVGA00000000 | Human feces | 1993 | SP |
| CFSAN033882 | STm35 | LVFZ00000000 | Human feces | 1995 | SP |
| CFSAN033883 | STm36 | LVFY00000000 | Cold chicken | 1995 | SP |
| CFSAN033884 | STm37 | LVFX00000000 | Raw pork sausage | 1996 | SP |
| CFSAN033885 | STm38 | LUJC00000000 | Human feces | 1997 | SP |
| CFSAN033886 | STm39 | LUJB00000000 | Human feces | 1998 | SP |
| CFSAN033887 | STm40 | LUJA00000000 | Lettuce | 1998 | SP |
| CFSAN033889 | STm42 | LUIZ00000000 | Human feces | 1999 | SP |
| CFSAN033890 | STm43 | LVFV00000000 | Human feces | 2000 | SP |
| CFSAN033891 | STm44 | LVFU00000000 | Blood | 2000 | SP |
| CFSAN033892 | STm45 | LUIY00000000 | Raw pork sausage | 2000 | SP |
| CFSAN033893 | STm46 | LVFT00000000 | Raw Tuscan sausage | 2002 | SP |
| CFSAN033894 | STm47 | LUIX00000000 | Human feces | 2003 | SP |
| CFSAN033895 | STm48 | LUIW00000000 | Brain abscess | 2005 | SP |
| CFSAN033896 | STm49 | LVFS00000000 | Human feces | 2010 | SP |
| CFSAN033898 | 12288/06 | LUIV00000000 | Swine | 2006 | SC |
| CFSAN033904 | 5937/06 | LUIQ00000000 | Cold chicken | 2006 | SC |
| CFSAN033913 | 16240/09 | LUIJ00000000 | Ready-to-eat dish | 2009 | MS |
| CFSAN033914 | 16202/09 | LUII00000000 | Industrialized product | 2009 | RS |
| CFSAN033918 | 9461/10 | LUIF00000000 | In natura meat | 2010 | SC |
| CFSAN033921 | 3057/10 | LUID00000000 | Frozen chicken carcass | 2010 | PR |
| CFSAN033922 | 6346/10 | LUIC00000000 | Chicken | 2010 | SP |
| CFSAN033923 | 5635/10 | LVFL00000000 | Unknown (food) | 2010 | RS |
| CFSAN033924 | 9109/10 | LVFK00000000 | Swine | 2010 | PR |
| CFSAN033925 | 426/10 | LUIB00000000 | Chicken | 2010 | SC |
| CFSAN033928 | 6709/11 | LVFJ00000000 | Cold chicken | 2011 | RS |
| CFSAN033929 | 948/12 | LUHY00000000 | Raw salad | 2012 | BA |
| CFSAN033930 | 1103/12 | LUHX00000000 | Swine (homemade salami) | 2012 | RS |
| CFSAN033932 | 3330/12 | LUHW00000000 | Roast beef | 2012 | SC |
| CFSAN033933 | 994/13 | LUHV00000000 | Final product sales (animal origin) | 2013 | SP |
a
CFSAN, Center for Food Safety and Applied Nutrition.
b
WGS, Whole-Genome Shotgun.