Table 5.
Comparison on simulated datasets for RSMT: number of times and percentage that the best scoring tree (including ties) is obtained by the four methods
| Probe # | Growth factor | RSMT Best score count | (Best score percentage) | |||
|---|---|---|---|---|---|---|
| FISHtree | MSTtree | MPTtree | EXACTtree | |||
| 4 | 0.4 | 92 (46 %) | 137 (68.5 %) | 196 (98 %) | 200 | |
| 6 | 0.4 | 70 (35 %) | 98 (49 %) | 194 (97 %) | N/A | |
| 8 | 0.4 | 41 (20.5 %) | 69 (34.5 %) | 196 (98 %) | N/A | |
| 16 | 0.4 | N/A | 53 (26.5 %) | 200 (100 %) | N/A | |
| 4 | 0.5 | 93 (46.5 %) | 130 (65 %) | 194 (97 %) | 200 | |
| 6 | 0.5 | 68 (34 %) | 99 (49.5 %) | 196 (98 %) | N/A | |
| 8 | 0.5 | 40 (20 %) | 64 (32 %) | 195 (97.5 %) | N/A | |
| 16 | 0.5 | N/A | 57 (28.5 %) | 200 (100 %) | N/A | |
EXACTtree results for datasets with over four gene probes are not available due to the time limitation