Subject area	Biology
More specific subject area	Complement and Atherosclerosis
Type of data	Tables, Figure
How data was acquired	RNA-sequencing was performed using Illumina HiSeq 2500. Gene expression data were input into the DAVID online tool for Gene Ontology and KEGG Pathway analysis.
Data format	Analyzed, raw
Experimental factors	RNA was isolated from human monocyte-derived macrophages (HMDM) incubated with either oxidized (oxLDL) or acetylated low-density lipoprotein (acLDL) in the presence or absence of C1q.
Experimental features	RNA-seq analysis was performed and data subjected to gene ontology analysis to identify biological processes, molecular functions and cellular components modulated by C1q
Data source location	Long Beach, CA
Data accessibility	Analyzed data is within this article and raw data is available at the NCBI database at GEO series accession number GEO:GSE80442,http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE80442