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. 2016 Sep 6;113(38):10565–10570. doi: 10.1073/pnas.1603539113

Fig. S9.

Fig. S9.

Increase of the radius of gyration of the bare protein ΔRgProt, computed from the atomic coordinates of the protein atoms (including heme) after photodissociation, and averaged over 10,000 simulations of the small simulation system. Absorption of additional photons was simulated as described in Materials and Methods. ΔRgProt was scaled by ρp/(ρpρbulk) (ρbulk=334 e⋅nm−3, ρp=440 e⋅nm−3) to allow direct comparison with the radius of gyration computed from a Guinier analysis. See Materials and Methods for details. Including the CO atoms yields ΔRgProt curves that are nearly identical to the curves shown here, suggesting that CO hardly contributes to ΔRgProt. The zero photon curve (blue) fluctuates within the statistical uncertainty up to 5 ps. For times larger than 5 ps, small systematic patterns appear, presumably due the onset of temperature and pressure coupling at 5 ps (SI Materials and Methods).