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. 2016 Sep 26;6:34137. doi: 10.1038/srep34137

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Copyright © 2016, The Author(s)

This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/

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Maximum likelihood phylogeny is based on 87,868 concatenated core SNPs. Each Philippine Xoo lineage is denoted in green = PX-A (PXO71, PXO282, PXO524, PXO563, and PXO602), blue = PX-B (PXO86, PXO211, PXO145), and red = PX-C (PXO99^A). Black dots in the tree represent a bootstrap value >60. Information on the Japanese Xoo strain MAFF311018, the Korean Xoo strain KACC10331, the African Xoo strain AXO1947, and the Philippine Xanthomonas oryzae pv. oryzicola strain BLS256 was included.