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. 2004 Jul 15;101(30):10872–10877. doi: 10.1073/pnas.0402674101

Table 1. Relative autocatalytic efficiency of the nine experimental nodes in isolated reactions.

Product k1 (kuncat), M-1·s-1 Km, μM k6 (kcat), s-1 k6/Km, M-1·s-1 Krel* Score
T5 0.08 130 0.09 690 69 8.4
T2 0.10 320 0.09 280 22 6.9
T8 0.09 860 0.10 120 11 5.7
T3 0.09 990 0.08 80 7.1 4.8
T7 0.10 970 0.03 31 2.5 4.8
T6 0.13 1,000 0.04 40 2.5 4.5
T9 0.10 1,000 0.02 20 1.6 4.2
T1 0.08 970 0.01 10 1.0 3.0
T4 <1 2.4

The kinetic parameters obtained from fitting the rates of product formation to template-assisted ligation reaction model (25) (see Fig. 12) using the program simfit (34).

*

Krel equal to the [(k6/Km)/k1] for each reaction divided by [(k6/Km)/k1] of the slowest measurable reaction (to make T1).

Values are in kcal/mol, calculated by using the scoring method described in the text for each homotrimer catalyst-product complex.

No intermediate species was detected.