Figure 1.
Model workflow scheme. Schematic representation of the model workflow, exemplified for PS synthase. (A) In every time step the order of reaction events is randomized. (B) A random number is drawn Nmax times, if the number exceeds the threshold P the reaction is performed once. (C) A random CDP-DG object i is taken from the substrate list, here CDP-DG list. The reaction consumes a serine precursor molecule and releases a CMP from the CDP-DG headgroup (sn3 position). The new PS object is appended to the product list, here PS list.