Table 4.
Differential gene expression in lipid accumulation related pathways
| Product | Gene name | EC number | Trinity ID | Log2FCa (48 h) | Log2FC (84 h) |
|---|---|---|---|---|---|
| Fatty acid biosynthyesis pathway | |||||
| acetyl-CoA carboxylase | ACC | EC:6.4.1.2 | comp6756_c0_seq1 | −1.71 | −0.63 |
| biotin carboxylase | BC | EC:6.3.4.14 | comp12323_c26_seq1 | 0.82 | 2.55 |
| malonyl-CoA ACP transacylase | MAT | EC:2.3.1.39 | comp11367_c0_seq2 | −1.27 | −0.74 |
| KAS Beta-ketoacyl-ACP synthase | KASII | EC:2.3.1.179 | comp11672_c1_seq3 | 0.48 | 0.72 |
| KAS Beta-ketoacyl-ACP synthase | KASIII | EC:2.3.1.180 | comp10141_c0_seq2 | 0.27 | 0.35 |
| Beta-ketoacyl-ACP reductase | KAR | EC:1.1.1.100 | comp10720_c0_seq1 | 1.23 | 0.74 |
| beta-hydroxyacyl-ACP dehydrase | HAD | EC:4.2.1.59 | comp12130_c0_seq1 | 0.31 | 1.43 |
| Enoyl-ACP reductase | EAR | EC:1.3.1.10 | comp5575_c1_seq1 | −2.23 | 0.10 |
| acyl-ACP desaturase | AAD | EC:1.14.19.2 | comp12618_c0_seq1 | 0.27 | 0.45 |
| Oleoyl-ACP thioesterase | OAT | EC:3.1.2.14 | comp10287_c1_seq1 | 0.54 | 0.53 |
| Triacylglycerol biosynthesis pathway | |||||
| glycerol kinase | GK | EC:2.7.1.30 | comp17390_c0_seq1 | 1.21 | 1.12 |
| glycerol-3-phosphate O-acyltransferase | GPAT | EC:2.3.1.15 | comp8649_c0_seq4 | 0.14 | 2.41 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AGPAT | EC:2.3.1.51 | comp8576_c1_seq1 | 1.05 | 0.99 |
| phosphatidate phosphatase | PP | EC:3.1.3.4 | comp10073_c0_seq1 | −0.75 | −3.36 |
| diacylglycerol O-acyltransferase | DGAT | EC:2.3.1.20 | comp8627_c0_seq2 | 0.08 | 0.15 |
| Fatty acid catabolism pathway | |||||
| acyl-CoA synthetase | ACSL | EC:6.2.1.3 | comp11861_c1_seq8 | −0.57 | −0.29 |
| acyl-CoA oxidase | AOx | EC:1.3.3.6 | comp8247_c0_seq2 | 2.17 | 1.24 |
| acyl-CoA dehydrogenase | ACDH | EC:1.3.8.7 | comp12261_c15_seq6 | 0.62 | 1.22 |
| enoyl-CoA hydratase | ECH | EC:4.2.1.17 | comp8664_c0_seq1 | 0.46 | 0.27 |
| 3-hydroxyacyl-CoA dehydrogenase | HADH | EC:1.1.1.35, 1.1.1.211 | comp13763_c0_seq1 | 1.64 | 1.97 |
| acetyl-CoA C-acyltransferase | ACAT | EC:2.3.1.16, 2.3.1.9 | comp12241_c5_seq15 | 0.89 | 0.02 |
| Starch biosynthesis and catabolism, and ethanol fermentation pathway | |||||
| phosphoglucomutase | PGM | EC:5.4.2.2 | comp10999_c2_seq3 | −1.11 | −0.12 |
| ADP-glucose pyrophosphorylase | AGPase | EC:2.7.7.27 | comp11635_c1_seq2 | 0.30 | 1.67 |
| starch synthase | SS | EC:2.4.1.21 | comp13246_c0_seq1 | 0.04 | 0.30 |
| 1,4-α-glucan branching enzyme | BE | EC:2.4.1.18 | comp7752_c1_seq1 | −1.47 | −1.66 |
| hexokinase | HXK | EC:2.7.1.1 | comp5345_c0_seq1 | −0.20 | 1.49 |
| β-amylase | β-AMY | EC:3.2.1.2 | comp13107_c0_seq1 | 1.49 | 1.36 |
| α-amylase | α-AMY | EC:3.2.1.1 | comp11995_c1_seq7 | 2.22 | 1.10 |
| oligo-1,6-glucosidase | O1,6G | EC:3.2.1.10 | comp11995_c1_seq11 | 2.20 | 1.49 |
| starch phosphorylase | Spase | EC:2.4.1.1 | comp12085_c7_seq13 | 0.79 | 1.47 |
| pyruvate decarboxylase | PDC | EC:4.1.1.1 | comp6820_c0_seq2 | −0.30 | 0.93 |
| alcohol dehydrogenase | ADH | EC:1.1.1.1 | comp11611_c1_seq3 | 0.71 | 1.13 |
| Pyruvate dehydrogenase complex | PDHC | EC:1.2.4.1, 2.3.1.12, 1.8.1.4 | comp12893_c0_seq1 | 1.48 | 1.90 |
a