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. 2016 Sep 23;60(10):6281–6293. doi: 10.1128/AAC.00352-16

TABLE 1.

Binding sites and binding energies of compounds 4c and 4a as obtained from different docking algorithms

Compounda AutoDock4
AutoDock Vina
PatchDock/FireDock
SwissDock
Energy (kJ/mol) Site Energy (kJ/mol) Site Energy (kJ/mol) Site Energy (kJ/mol) Site
4c-1 −28.33 Small subunit −30.96 Hinge −31.27 Small subunit −32.09 Hinge
4c-2 −26.48 Small subunit −33.47 Hinge −37.89 Small subunit −32.80 Hinge
4a −21.51 Small subunit −27.61 Hinge −28.48 Small subunit −28.20 Hinge
a

Compounds 4c-1 and 4c-2 are stereoisomers separated from compound 4c (racemic).