TABLE 3.
TC | Position of integration sitea |
Size (kb) of integrated DNA |
Additional integration site | |||
---|---|---|---|---|---|---|
First SNV of CORb left of vanB | First SNV of COR right of vanB (integrase site) | Minimum amt transferredc | COR between the two delimiting SNVs |
|||
Left | Right | |||||
TC-A | −49.87 | +100.8 | 184.6 | 574 | 307 | |
TC-B | −10.6 | +49.9 | 94.5 | 3,112 | 4,315 | |
TC-C | −16.7 | +27.7 | 78.4 | 6,229 | 1,159 | |
TC-D | 0 | +2.9 | 36.9 | 654 | 2,466 | 9,098d |
TC-E | −14.9 | +15.1 | 64 | 2,005 | 2,171 | |
TC-F | −10.9 | +47.9 | 92.8 | 3,112 | 2,049 | |
TC-G | −61.8 | +27.6 | 123.4 | 2,878 | 1,157 | |
TC-H | −60.2 | +81.3 | 175.5 | 593 | 126 | |
TC-I | −16.9 | +124 | 174.9 | 6,182 | 11 | |
TC-J | −16.9 | +79.9 | 130.8 | 6,182 | 1,240 | |
TC-K | −10.9 | +78.7 | 123.6 | 3,112 | 185 | |
TC-L | −16.9 | +48.4 | 99.3 | 6,182 | 947 | |
TC-M | −10.9 | +36 | 80.9 | 3,113 | 7,373 | 11,719e |
TC-N | −14.9 | +5.9 | 54.8 | 2,005 | 371 |
Considering the first position of Tn5382 to the left side (negative values) and the last position of Tn5382 to the right side (positive values).
COR, crossover region.
Including the 34-kb Tn5382 element harboring vanB.
Position −14 left of vanB.
Position −16.9 of vanB.