TABLE 2.
Parametera | Values(s) forb: |
|||
---|---|---|---|---|
Apo-CmLeuRS CP1 | CmLeuRS CP1 + Nva2AA | CmLeuRS CP1 + Ile2AA | CmLeuRS CP1 + AN6426-AMP | |
Data collection statistics | ||||
Beam line | Soleil, France | ESRF, France (ID23-1) | SSRF, China | Soleil, France |
Space group | P41212 | P41212 | P43212 | P43212 |
Cell dimensions | ||||
a, b, c (Å) | 107.71, 107.71, 311.20 | 107.73, 107.73, 309.51 | 64.93, 64.93, 167.25 | 65.07, 65.07, 167.30 |
α, β, γ (°) | 90.00, 90.00, 90.00 | 90.00, 90.00, 90.00 | 90.00, 90.00, 90.00 | 90.00, 90.00, 90.00 |
Resolution (Å) | 48–2.70 (2.70–2.84) | 48–2.30 (2.30–2.36) | 50–1.76 (1.76–1.79) | 60–2.10 (2.10–2.21) |
Rsym | 4.8 (93.4) | 11.3 (129.0) | 17.2 (121.0) | 4.4 (47.3) |
I/σI | 30.3 (2.7) | 16.5 (1.9) | 19.5 (2.1) | 29.2 (5.6) |
Completeness (%) | 99.8 (99.0) | 99.9 (99.3) | 99.7 (95.3) | 99.9 (99.4) |
Redundancy | 8.7 (9.0) | 8.1 (7.9) | 23.8 (18.6) | 10.4 (10.6) |
Refinement statistics | ||||
Resolution (Å) | 2.7 | 2.3 | 1.7 | 2.10 |
No. of reflections work/free | 48,772/2,609 | 77,686/4,014 | 29,524/1,573 | 20,768/1,122 |
Rwork/Rfree | 0.209/0.253 | 0.201/0.236 | 0.196/0.232 | 0.200/0.238 |
No. of: | ||||
Protein atoms | 8,683c | 8,892c | 2,235 | 2,185 |
Ligands | 104d | 27e | 38f | |
Ions | 2 (K+) | 10 (2× PO42−) | 5 (PO42−) | |
Water molecules/other | 71 | 371/16g | 232 | 51 |
B factor | ||||
Protein | 90.1 | 47.2 | 24.3 | 54.9 |
Ligand | 64.3 | 17.3 | 50.5 | |
Ions | 43.4 (K+) | 46.6 (PO42−) | 98.9 (PO42−) | |
Water/other | 65.7 | 42.8/50.8 (EGh) | 34.8 | 51.6 |
RMSD | ||||
Bond lengths (Å) | 0.010 | 0.009 | 0.014 | 0.009 |
Bond angles (°) | 1.41 | 1.38 | 1.67 | 1.61 |
, where is the average of symmetry (or Friedel)-related observations of a unique reflection; I, intensity of a reflection.
Values in parentheses are for the highest-resolution shell.
Four subunits.
Four Nva2AA molecules.
Ile2AA.
AN6426-AMP.
Four ethylene glycol molecules.
EG, ethylene glycol.