Table 1. SNPs of PpEC23 genes among P. pachyrhizi isolates.
Isolate | Year | Origin | Source | SNPs* |
---|---|---|---|---|
IN73-1 | 1973 | India | D. N. Thapliyal, Pantnagar | 1801T or G; 1805C or G |
TW72-1 | 1972 | Taiwan, China | Lung-Chi Wu, Taipei | 1801T or G; 1805C or G |
TW80-2 | 1980 | Taiwan, China | AVRDC, Taiwan | 1801T or G; 1805C or G |
BZ01-1 | 2001 | Brazil | J. T. Yorinori, Parana | 604A; 627T; 662A; 1126G; 1174A;1321T; 1654G; 1667T; 1801T or G; 1805C |
PG01-3 | 2001 | Paraguay | W. M. Morel, Capitan Miranda | 604G or A; 627C or T; 662T or A; 1126A or G; 1174G or A; 1321C or T; 1654A or G; 1667C or T; 1801T or G; 1805C or G |
HW94-1 | 1994 | Hawaii, US | E. Kilgore, Oahu | 604G or A; 627C or T; 662T or A; 1126A or G; 1174G or A; 1321C or T; 1654A or G; 1667C or T; 1805C or G |
AU79-1 | 1979 | Australia | Unknown | 1801T or G; 1805C or G |
SA01-1 | 2001 | South Africa | Z. A. Pretorius, Natal Province | 1801T or G; 1805C or G |
ZM01-1 | 2001 | Zimbabwe | C. Levy, Harare | 1801T or G; 1805C or G |
AL04-1 | 2004 | Alabama, US | R. Frederick, Mobile County | 1801T or G |
*: The genomic sequence of PpEC23 gene from LA04-1 (Louisiana, US) was taken as the reference sequence. Only variations are shown. SNP locations are shown schematically in Fig 2C.