Table 1.
Primer set | Forward (5′ to 3′) |
Reverse (5′ to 3′) |
Product size (bp) | Annealing temperature (°C) |
---|---|---|---|---|
GDH1 | ACAACTGAAACCTTTGCATCTGG | CGGTCGCATCTGTACGGTAA | 278 | 51 |
GDH2 | Same as GDH1 | TCAAYTTCCAYGAYGCACCA | 391 | 51 |
SG1 | CCTTGGAGCAAGGAATATTTTGAATCTG | CTTCTTGGCTCGGTTGTGTCAAGCG | 695 | 53 |
SO3 | Same as SG1 | AGAGCGATATTGACCACGAATAAAC | 732 | 53 |
MG1 | Same as SG1 | CCCGTCTACTTTACCAGAAGTA | 715 | 51 |
MG2 | Same as SG1 | GTCTTTTCAGATCATTATCAGTAGGC | 706 | 51 |
MG3 | CGTGGTCGAGTCTATCACAGATCTCGCT | CAGAAACAAAGGTTTCAGTGGTAGAC | 788 | 53 |
UNIV∗ | GTGSTGCAYGGYTGTCGTCA | ACGTCRTCCMCACCTTCCTC | ~200 | 60 |
∗Positive control primers, universal for bacterial 16S rRNA, were chosen based on [17].