Table 3.
Category of lncRNAs | Category of functional terms | ID | Term | Gene count | FDR |
---|---|---|---|---|---|
Upregulated | GO-BP | GO: 0008150 | Biological_process | 469 | 3.46E-22 |
GO-BP | GO: 0009987 | Cellular process | 434 | 8.85E-12 | |
GO-BP | GO: 0050896 | Response to stimulus | 261 | 0.0004501 | |
GO-BP | GO: 0050794 | Regulation of cellular process | 303 | 0.003139471 | |
GO-BP | GO: 0044699 | Single-organism process | 378 | 0.004578225 | |
GO-CC | GO: 0005575 | Cellular_component | 510 | 2.68E-09 | |
GO-MF | GO: 0003674 | Molecular_function | 481 | 1.52E-22 | |
GO-MF | GO: 0005488 | Binding | 399 | 0.002334936 | |
GO-MF | GO: 0060089 | Molecular transducer activity | 74 | 0.016441823 | |
Downregulated | GO-BP | GO: 0008150 | Biological_process | 1852 | 2.03E-100 |
GO-BP | GO: 0009987 | Cellular process | 1685 | 8.04E-41 | |
GO-BP | GO: 0044699 | Single-organism process | 1517 | 2.59E-23 | |
GO-BP | GO: 0044763 | Single-organism cellular process | 1386 | 2.07E-18 | |
GO-BP | GO: 0008152 | Metabolic process | 1337 | 4.59E-18 | |
GO-CC | GO: 0005575 | Cellular_component | 1965 | 2.83E-43 | |
GO-CC | GO: 0005623 | Cell | 1758 | 1.73E-08 | |
GO-CC | GO: 0044464 | Cell part | 1753 | 2.42E-08 | |
GO-CC | GO: 0005622 | Intracellular | 1546 | 9.50E-07 | |
GO-CC | GO: 0044424 | Intracellular part | 1504 | 1.05E-05 | |
GO-MF | GO: 0003674 | Molecular_function | 1849 | 1.12E-96 | |
GO-MF | GO: 0005488 | Binding | 1554 | 3.18E-22 | |
GO-MF | GO: 0005515 | Protein binding | 1174 | 6.27E-10 | |
GO-MF | GO: 0003824 | Catalytic activity | 675 | 6.37E-10 | |
GO-MF | GO: 0016740 | Transferase activity | 292 | 9.63E-07 | |
KEGG | hsa03010 | Ribosome | 32 | 0.009558616 |
LncRNA – long non-coding RNA; GO – Gene Ontology; MF – molecular function; CC – cellular component; BP – biological process; FDR – false discovery rate.