Table 5.

SNP identification in strains A18, A27, M3, M7, M24, and W6 using M. africanum as the reference.

		PPE					ALL
		SNPs	S	N	N/S	dn/ds	SNPs	S	N	N/S	dn/ds
EAI2_Manilla	A18	169	97	72	0.74	0.61	1887	712	1175	1.65	0.59
T1	A27	160	101	59	0.58	0.44	1805	666	1139	1.71	0.61
Haarlem-3	M3	128	78	50	0.64	0.45	1795	675	1120	1.66	0.58
LAM3	M7	111	66	45	0.68	0.55	1699	626	1073	1.71	0.59
Ancient Beijing	M24	155	87	68	0.78	0.49	1828	668	1160	1.74	0.61
Modern Beijing	W6	105	57	48	0.84	0.56	1815	646	1169	1.81	0.63
Avg		138	81	57	0.71	0.52		666	1139	1.71	0.60