Table 2. Characteristics of C. microphyllum gene-derived SNPs mined from the abiotic stress-responsive genes of ICC 4958 representing different abundant functional classes.
| Functional classification | Total SNPs mined | Non-Synonymous SNPs | Regulatory SNPs | |
|---|---|---|---|---|
| TFs | MYB (myeloblastosis) | 67 (17) | 14 (6) | 17 (5) |
| bHLH (basic helix-loop-helix) | 209 (23) | 17 (10) | 50 (9) | |
| NAC (No apical meristem Arabidopsis transcription activation factor-cup shaped cotyledon) | 216 (13) | 47 (10) | 45 (6) | |
| KOG | J (translation, ribosomal structure and biogenesis) | 93 (13) | 2 (2) | 54 (7) |
| O (post-translational modification, protein turnover and chaperones) | 138 (19) | 10 (6) | 65 (10) | |
| C (Energy production and conversion) | 126 (12) | 10 (5) | 22 (6) | |
| KEGG | Genetic information processing | 180 (13) | 13 (3) | 91 (9) |
| Metabolism | 538 (65) | 82 (30) | 169 (32) | |
| Environmental information processing | 61 (7) | 8 (3) | 21 (2) | |
Parentheses indicate the number of genes with SNPs.