Table 2.
List of potentially all genes coding for enzymes involved in H2O2 metabolism in contigs of C. cochliodes genome
| Gene name | In contig # | Seq. identity* | Closest neighbour** | # Introns | Gene-superfamily relations |
|---|---|---|---|---|---|
| A) genes coding for enzymes producing H2O2 | |||||
| CcochCuZnSOD | 0613 | 98 % | CgCuZnSOD | 4 | Copper/zinc superoxide dismutase superfamily (SODC) |
| CcochDAAO | 0702 | 85 % | Mth_G2QLH3 | 3 | Flavin D-amino acid oxidase (peroxisomal) |
| CcochFeMnSOD1 | 0353 | 91 % | TthFeMnSOD | 2 | Iron/manganese superoxide dismutase superfamily |
| CcochFeMnSOD2 | 1984 & 0805 | 93 % | CgFeMnSOD1 | 3 | Iron/manganese superoxide dismutase superfamily |
| CcochFeMnSOD3 | 0879 | 94 % | CgFeMnSOD2 | 1 | Iron/manganese superoxide dismutase superfamily |
| CcochFlOx1 | 0556 | 55 % | Colgra_E3Q5F0 | 1 | GMC superfamily (flavin oxidases) |
| CcochGlOx1 | 0600 | 53 % | Scap_A0A084G823 | 7 | GMC superfamily (flavin oxidases): glucose oxidase |
| CcochNOx1 | 0029 | 93 % | CgNox2 | 2 | NADPH oxidase |
| B) genes coding for enzymes degrading H2O2 | |||||
| CcochkatG1 | 0012 | 93 % | CgkatG1 | none | peroxidase-catalase superfamily: bifunctional catalase-peroxidase |
| Ccochccp | 0676 | 95 % | Cgccp | 2 | peroxidase-catalase superfamily: cytochrome c peroxidase |
| Ccochpox2a | 3115 & 3438 | 68 % | Cthepox2a | 1 | peroxidase-catalase superfamily: Family II prob. manganese-dependent |
| CcochhyBpox1 | 3712 & 3350 | 100 % | CghyBpox1 | none | peroxidase-catalase superfamily: hybrid B peroxidase |
| CcochhyBpox2 | 0794 | 93 % | CghyBpox2 | 1 | peroxidase-catalase superfamily: hybrid B peroxidase |
| Ccochcyox1 | 2133 & 0418 | 83 % | CgCyOx1 | 3 | peroxidase-cyclooxygenase superfamily: cyclooxygenase |
| Ccochlds | 1074 & 4463 | 91 % | Cglds1 | 5 | peroxidase-cyclooxygenase superfamily: linoleate diol synthase |
| Ccochdyprx | 0391 | 89 % | Cgdyprx | none | peroxidase-dismutase superfamily: Dyp_B peroxidase (fusion w. PFL) |
| Ccochhtp1 | 1650 | 92 % | Cghtp1 | 3 | peroxidase-peroxygenase superfamily: heme-thiolate peroxidase |
| Ccochhtp2 | 2302 | 95 % | Cghtp3 | 3 | peroxidase-peroxygenase superfamily: heme-thiolate peroxidase |
| Ccochhtp3 | 1018 | 85 % | Cghtp4 | 2 | peroxidase-peroxygenase superfamily: heme-thiolate peroxidase |
| Ccochvcpo | 0469 & 1446 | 93 % | Cgvcpo | 3 | non heme peroxidases: vanadium haloperoxidase |
| Ccochgpx | 0466 | 84 % | Mthgpx | 1 | non-metal peroxidases: glutathione peroxidase |
| Ccoch1cysprx | 1586 | 96 % | Cg1cysprx | 1 | non metal peroxidases: 1-cysteine peroxiredoxin |
| Ccoch2cysprx | 1595 | 99 % | Cg2cysprx | 2 | non-metal peroxidases: typical 2-cysteine peroxiredoxin |
| CcochprxII | 0388 & 1977 | 95 % | CgprxII | 1 | non-metal peroxidases: atypical 2-cysteine peroxiredoxin |
| CcochkatA1 | 0438 & 2821 | 94 % | Cgkat1 | 2 | heme catalase superfamily: large subunit heme catalase |
| CcochkatA2 | 1883 & 2899 | 87 % | Cgkat2 | 3 | heme catalase superfamily: large subunit heme catalase |
| CcochkatB1 | 0511 | 86 % | Cgkat3 | 2 | heme catalase superfamily: small subunit heme catalase |
| CcochkatB2 | 0351 | 67 % | SschkatE | 2 | heme catalase superfamily: small subunit heme catalase |