| ALT | Alternative lengthening of telomeres |
| AAA+ ATPases | ATPases Associated with diverse cellular Activities |
| AKTIP | AKT-interacting protein |
| ATM | Ataxia telangiectasia mutated |
| ATR | Ataxia telangiectasia and Rad3-related protein |
| BML | Bloom syndrome protein |
| CAB box | Cajal body box |
| CB | Cajal body |
| CBCA | 5′ cap-binding complex |
| CHIP | C-terminus of HSP70 interacting protein |
| CR4/5 | conserved region 4 and 5 |
| CRISPR | Clustered regularly interspaced short palindromic repeats |
| CRM1 | Chromosomal maintenance 1 |
| CST | CTC1/STN1/TEN1 |
| D-loop | Displacement loop |
| DAT | Dissociates activities of telomerase |
| DC | Dyskeratosis congenita |
| DCP2 | Decapping mRNA 2 |
| DCP2 | decapping mRNA 2 |
| DHS | DNAse I hypersensitive site |
| ERE | Estrogen response elements |
| FANCJ | Fanconi anemia group J helicase |
| FEN1 | FLAP enodnuclease 1 |
| H3K9 | Histone 3 Lysine 9 |
| Hdm2 | Human double minute 2 |
| HDR | Homology Directed Repair |
| hESC | human embryonic stem cell |
| HH | Hoyeraal-Hreidarsson |
| HIF | hypoxia-inducible factor |
| hnRNPA1 | Heterogeneous nuclear ribonucleoprotein A1 |
| HSP90 | Heat Shock Protein 90 |
| hTERT | human telomerase reverse transcriptase |
| hTR | human telomerase RNA |
| IFD | Insertion in fingers domain |
| IPF | Idiopathic pulmonary fibrosis |
| MCPH1 | Microcephalin 1 |
| MKRN1 | Makorin ring finger protein 1 |
| MRN | MER11-RAD50-NBS1 |
| NEXT | nuclear exosome targeting |
| NF-KB | Nuclear factor kappa-light-chain-enhancer of activated B cells |
| NNS | Nrd1-Nab3-Sen1 |
| PARN | polyadenosine-specific ribonuclease |
| PARP | poly(ADP-ribose) polymerase |
| PCNA | Proliferating cell nuclear antigen |
| PINX1 | PIN2/TERF1 interacting, telomerase inhibitor 1 |
| PIP box | PCNA interacting protein box |
| PK | Protein Kinase |
| Plk1 | Polo-like kinase 1 |
| PNUTS | Protein phosphatase 1 nuclear-trafficking subunit |
| POT1 | Protein of telomeres 1 |
| PUA | pseudouridine synthase and archaeosine transglycosylase |
| RAP | Repeat addition processivity |
| Rap1 | Repressor activator protein 1 |
| RECQL4 | RecQ helicase-like 4 |
| RNAPII | RNA polymerase II |
| RNP | Ribonucleoprotein |
| RTEL1 | Regulator of telomere length 1 |
| S1P | Sphingosin-1-phosphate |
| scaRNA | small Cajal body specific RNA |
| SENP1 | sentrin-specific peptidase 1 |
| snoRNA | small nucleolar RNA |
| Sp1 | Specificity protein 1 |
| SSD | C-terminal SHQ1-specific domain |
| SUMO | Small ubiquitin-like modifier |
| t-loop | telomere loop |
| TEL | TPP1 glutamate and leucine-rich |
| TEN | TERT Essential N-terminal domain |
| TERRA | Telomeric repeat containing RNA |
| TF | Transcription Factor |
| TID | Telomerase inhibitory domain |
| TIF | Telomere dysfunction induced foci |
| TIN2 | TRF1-interacting nuclear factor 2 |
| TPP1 | previously known as TINT1 (TIN2 interacting protein), PTOP (POT1 and TIN2 organizing protein) and PIP1 (POT1 interacting protein) |
| TRAMP | Trf4/5-Air1/2-Mtr4 |
| TRBD | Telomerase RNA binding domain |
| TRF1/2 | Telomere repeat-binding factors ½ |
| Ubc9 | Ubiquitin-conjugating enzyme 9 |
| WRN | Werner syndrome ATP-dependent helicase |
| XPB | Xeroderma pigmentosum type B |
| Xrn1 | 5′-3′ Exoribonuclease 1 |
| Zscan4 | Zinc finger and SCAN domain containing 4 |