Table I.
Index | Primer sequence |
---|---|
shRNA-HDAC1-1 | F: 5′-CACCGCTCCATCCGTCCAGATAACACGAATGTTATCTGGACGGATGGAGC-3′ |
R: 5′-AAAAGCTCCATCCGTCCAGATAACATTCGTGTTATCTGGACGGATGGAGC-3′ | |
shRNA-HDAC1-2 | F: 5′-CACCGCAAGCAGATGCAGAGATTCACGAATGAATCTCTGCATCTGCTTGC-3′ |
R: 5′-AAAAGCAAGCAGATGCAGAGATTCATTCGTGAATCTCTGCATCTGCTTGC-3′ | |
shRNA-HDAC1-NC | F: 5′-CACCGCAATTTTTTTTTTTGATTCACGAATGAATCAAAAAAAAAAAAATGC-3′ |
R: 5′-AAAAGCAATTTTTTTTTTTGATTCATTCGTGAATCAAAAAAAAAAAAATGC-3′ | |
shRNA-HDAC2-1 | F: 5′-CACCGCAGATGCAGAGATTTAATGTCGAAACATTAAATCTCTGCATCTGC-3′ |
R: 5′-AAAAGCAGATGCAGAGATTTAATGTTTCGACATTAAATCTCTGCATCTGC-3′ | |
shRNA-HDAC2-2 | F: 5′-CACCGGCTGGAGGATTACATCATGCCGAAGCATGATGTAATCCTCCAGCC-3′ |
R: 5′-AAAAGGCTGGAGGATTACATCATGCTTCGGCATGATGTAATCCTCCAGCC-3′ | |
shRNA-HDAC2-NC | F: 5′-CACCGCAATTTTTTTTTTTGATTCACGAATGAATCAAAAAAAAAAAAATGC-3′ |
R: 5′-AAAAGCAATTTTTTTTTTTGATTCATTCGTGAATCAAAAAAAAAAAAATGC-3′ | |
shRNA-HDAC4-1 | F: 5′-CACCGGAGCTCGTGGTACTCAAACACGAATGTTTGAGTACCACGAGCTCC-3′ |
R: 5′-AAAAGGAGCTCGTGGTACTCAAACATTCGTGTTTGAGTACCACGAGCTCC-3′ | |
shRNA-HDAC4-2 | F: 5′-CACCGGAACACATCAAGCACCAACACGAATGTTGGTGCTTGATGTGTTCC-3′ |
R: 5′-AAAAGGAACACATCAAGCACCAACATTCGTGTTGGTGCTTGATGTGTTCC-3′ | |
shRNA-HDAC4-NC | F: 5′-CACCGCAATTTTTTTTTTTGATTCACGAATGAATCAAAAAAAAAAAAATGC-3′ |
R: 5′-AAAAGCAATTTTTTTTTTTGATTCATTCGTGAATCAAAAAAAAAAAAATGC-3′ | |
shRNA-HDAC6-1 | F: 5′-CACCGCAATGGAAGAAGACCTAATCCGAAGATTAGGTCTTCTTCCATTGC-3′ |
R: 5′-AAAAGCAATGGAAGAAGACCTAATCTTCGGATTAGGTCTTCTTCCATTGC-3′ | |
shRNA-HDAC6-2 | F: 5′-CACCGGAAGAGCTGATGTTGGTTCACGAATGAACCAACATCAGCTCTTCC-3′ |
R: 5′-AAAAGGAAGAGCTGATGTTGGTTCATTCGTGAACCAACATCAGCTCTTCC-3′ | |
siRNA-HDAC6-NC | F: 5′-CACCGCAATTTTTTTTTTTGATTCACGAATGAATCAAAAAAAAAAAAATGC-3′ |
R: 5′-AAAAGCAATTTTTTTTTTTGATTCATTCGTGAATCAAAAAAAAAAAAATGC-3′ | |
β-actin | F: 5′-GTGGACATCCGCAAAGAC-3′ |
R: 5′-AAAGGGTGTAACGCAACTA-3′ |
shRNA, short hairpin RNA; HDAC, histone deacetylase; NC, negative control; F, forward; R, reverse.